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RooStats::MCMCCalculator Class Reference

Bayesian Calculator estimating an interval or a credible region using the Markov-Chain Monte Carlo method to integrate the likelihood function with the prior to obtain the posterior function.

By using the Markov-Chain Monte Carlo methods this calculator can work with model which require the integration of a large number of parameters.

MCMCCalculator is a concrete implementation of IntervalCalculator. It uses a MetropolisHastings object to construct a Markov Chain of data points in the parameter space. From this Markov Chain, this class can generate a MCMCInterval as per user specification.

The interface allows one to pass the model, data, and parameters via a workspace and then specify them with names.

After configuring the calculator, one only needs to ask GetInterval(), which will return an ConfInterval (MCMCInterval in this case).

Definition at line 31 of file MCMCCalculator.h.

Public Types

enum  { kSingleKey = (1ULL << (0)) , kOverwrite = (1ULL << (1)) , kWriteDelete = (1ULL << (2)) }
enum  {
  kIsOnHeap = 0x01000000 , kNotDeleted = 0x02000000 , kZombie = 0x04000000 , kInconsistent = 0x08000000 ,
  kBitMask = 0x00ffffff
}
enum  EDeprecatedStatusBits { kObjInCanvas = (1ULL << (3)) }
enum  EStatusBits {
  kCanDelete = (1ULL << (0)) , kMustCleanup = (1ULL << (3)) , kIsReferenced = (1ULL << (4)) , kHasUUID = (1ULL << (5)) ,
  kCannotPick = (1ULL << (6)) , kNoContextMenu = (1ULL << (8)) , kInvalidObject = (1ULL << (13))
}

Public Member Functions

 MCMCCalculator ()
 default constructor
 MCMCCalculator (RooAbsData &data, const ModelConfig &model)
 Constructor for automatic configuration with basic settings and a ModelConfig.
void AbstractMethod (const char *method) const
 Call this function within a function that you don't want to define as purely virtual, in order not to force all users deriving from that class to implement that maybe (on their side) unused function; but at the same time, emit a run-time warning if they try to call it, telling that it is not implemented in the derived class: action must thus be taken on the user side to override it.
virtual void AppendPad (Option_t *option="")
 Append graphics object to current pad.
virtual void Browse (TBrowser *b)
 Browse object. May be overridden for another default action.
ULong_t CheckedHash ()
 Check and record whether this class has a consistent Hash/RecursiveRemove setup (*) and then return the regular Hash value for this object.
virtual const char * ClassName () const
 Returns name of class to which the object belongs.
void Clear (Option_t *option="") override
 Set name and title to empty strings ("").
TObjectClone (const char *newname="") const override
 Make a clone of an object using the Streamer facility.
Int_t Compare (const TObject *obj) const override
 Compare two TNamed objects.
double ConfidenceLevel () const override
 Get the Confidence level for the test.
void Copy (TObject &named) const override
 Copy this to obj.
virtual void Delete (Option_t *option="")
 Delete this object.
virtual Int_t DistancetoPrimitive (Int_t px, Int_t py)
 Computes distance from point (px,py) to the object.
virtual void Draw (Option_t *option="")
 Default Draw method for all objects.
virtual void DrawClass () const
 Draw class inheritance tree of the class to which this object belongs.
virtual TObjectDrawClone (Option_t *option="") const
 Draw a clone of this object in the current selected pad with: gROOT->SetSelectedPad(c1).
virtual void Dump () const
 Dump contents of object on stdout.
virtual void Error (const char *method, const char *msgfmt,...) const
 Issue error message.
virtual void Execute (const char *method, const char *params, Int_t *error=nullptr)
 Execute method on this object with the given parameter string, e.g.
virtual void Execute (TMethod *method, TObjArray *params, Int_t *error=nullptr)
 Execute method on this object with parameters stored in the TObjArray.
virtual void ExecuteEvent (Int_t event, Int_t px, Int_t py)
 Execute action corresponding to an event at (px,py).
virtual void Fatal (const char *method, const char *msgfmt,...) const
 Issue fatal error message.
virtual void FillBuffer (char *&buffer)
 Encode TNamed into output buffer.
virtual TObjectFindObject (const char *name) const
 Must be redefined in derived classes.
virtual TObjectFindObject (const TObject *obj) const
 Must be redefined in derived classes.
virtual Option_tGetDrawOption () const
 Get option used by the graphics system to draw this object.
virtual const char * GetIconName () const
 Returns mime type name of object.
MCMCIntervalGetInterval () const override
 Main interface to get a ConfInterval.
const char * GetName () const override
 Returns name of object.
virtual char * GetObjectInfo (Int_t px, Int_t py) const
 Returns string containing info about the object at position (px,py).
virtual Option_tGetOption () const
const char * GetTitle () const override
 Returns title of object.
virtual UInt_t GetUniqueID () const
 Return the unique object id.
virtual Bool_t HandleTimer (TTimer *timer)
 Execute action in response of a timer timing out.
ULong_t Hash () const override
 Return hash value for this object.
Bool_t HasInconsistentHash () const
 Return true is the type of this object is known to have an inconsistent setup for Hash and RecursiveRemove (i.e.
virtual void Info (const char *method, const char *msgfmt,...) const
 Issue info message.
virtual Bool_t InheritsFrom (const char *classname) const
 Returns kTRUE if object inherits from class "classname".
virtual Bool_t InheritsFrom (const TClass *cl) const
 Returns kTRUE if object inherits from TClass cl.
virtual void Inspect () const
 Dump contents of this object in a graphics canvas.
void InvertBit (UInt_t f)
TClassIsA () const override
Bool_t IsDestructed () const
 IsDestructed.
virtual Bool_t IsEqual (const TObject *obj) const
 Default equal comparison (objects are equal if they have the same address in memory).
virtual Bool_t IsFolder () const
 Returns kTRUE in case object contains browsable objects (like containers or lists of other objects).
Bool_t IsOnHeap () const
Bool_t IsSortable () const override
Bool_t IsZombie () const
void ls (Option_t *option="") const override
 List TNamed name and title.
void MayNotUse (const char *method) const
 Use this method to signal that a method (defined in a base class) may not be called in a derived class (in principle against good design since a child class should not provide less functionality than its parent, however, sometimes it is necessary).
virtual Bool_t Notify ()
 This method must be overridden to handle object notification (the base implementation is no-op).
void Obsolete (const char *method, const char *asOfVers, const char *removedFromVers) const
 Use this method to declare a method obsolete.
void operator delete (void *, size_t)
 Operator delete for sized deallocation.
void operator delete (void *ptr)
 Operator delete.
void operator delete (void *ptr, void *vp)
 Only called by placement new when throwing an exception.
void operator delete[] (void *, size_t)
 Operator delete [] for sized deallocation.
void operator delete[] (void *ptr)
 Operator delete [].
void operator delete[] (void *ptr, void *vp)
 Only called by placement new[] when throwing an exception.
void * operator new (size_t sz)
void * operator new (size_t sz, void *vp)
void * operator new[] (size_t sz)
void * operator new[] (size_t sz, void *vp)
virtual void Paint (Option_t *option="")
 This method must be overridden if a class wants to paint itself.
virtual void Pop ()
 Pop on object drawn in a pad to the top of the display list.
void Print (Option_t *option="") const override
 Print TNamed name and title.
virtual Int_t Read (const char *name)
 Read contents of object with specified name from the current directory.
virtual void RecursiveRemove (TObject *obj)
 Recursively remove this object from a list.
void ResetBit (UInt_t f)
virtual void SaveAs (const char *filename="", Option_t *option="") const
 Save this object in the file specified by filename.
virtual void SavePrimitive (std::ostream &out, Option_t *option="")
 Save a primitive as a C++ statement(s) on output stream "out".
virtual void SetAxes (RooArgList &axes)
 set which variables to put on each axis
void SetBit (UInt_t f)
void SetBit (UInt_t f, Bool_t set)
 Set or unset the user status bits as specified in f.
virtual void SetChainParameters (const RooArgSet &set)
 specify the parameters to store in the Markov chain By default all the parameters are stored
virtual void SetConditionalObservables (const RooArgSet &set)
 set the conditional observables which will be used when creating the NLL so the pdf's will not be normalized on the conditional observables when computing the NLL
void SetConfidenceLevel (double cl) override
 set the confidence level for the interval (eg. 0.95 for a 95% Confidence Interval)
void SetData (RooAbsData &data) override
 Set the DataSet if not already there.
virtual void SetDrawOption (Option_t *option="")
 Set drawing option for object.
virtual void SetGlobalObservables (const RooArgSet &set)
 set the global observables which will be used when creating the NLL so the constraint pdf's will be normalized correctly on the global observables when computing the NLL
virtual void SetIntervalType (enum MCMCInterval::IntervalType intervalType)
 set what type of interval to have the MCMCInterval represent
virtual void SetKeysConfidenceAccuracy (double epsilon)
 Set the left side tail fraction.
virtual void SetKeysTerminationThreshold (double delta)
 When the shortest interval using Keys PDF could not be found to have the desired confidence level +/- the accuracy (see SetKeysConfidenceAccuracy()), the interval determination algorithm will have to terminate with an unsatisfactory confidence level when the bottom and top of the cutoff search range are very close to being equal.
void SetModel (const ModelConfig &model) override
 Set the Model.
virtual void SetName (const char *name)
 Set the name of the TNamed.
virtual void SetNameTitle (const char *name, const char *title)
 Set all the TNamed parameters (name and title).
virtual void SetNuisanceParameters (const RooArgSet &set)
 specify the nuisance parameters (eg. the rest of the parameters)
virtual void SetNumBins (Int_t numBins)
 set the number of bins to create for each axis when constructing the interval
virtual void SetNumBurnInSteps (Int_t numBurnInSteps)
 set the number of steps in the chain to discard as burn-in, starting from the first
virtual void SetNumIters (Int_t numIters)
 set the number of iterations to run the metropolis algorithm
virtual void SetParameters (const RooArgSet &set)
 specify the parameters of interest in the interval
virtual void SetPdf (RooAbsPdf &pdf)
 Set the Pdf if not already there.
virtual void SetPriorPdf (RooAbsPdf &pdf)
 Set the Prior Pdf if not already there.
virtual void SetProposalFunction (ProposalFunction &proposalFunction)
 set the proposal function for suggesting new points for the MCMC
void SetTestSize (double size) override
 set the size of the test (rate of Type I error) ( Eg. 0.05 for a 95% Confidence Interval)
virtual void SetTitle (const char *title="")
 Set the title of the TNamed.
virtual void SetUniqueID (UInt_t uid)
 Set the unique object id.
virtual void SetUseKeys (bool useKeys)
 set whether to use kernel estimation to determine the interval
virtual void SetUseSparseHist (bool useSparseHist)
 set whether to use sparse histogram (if using histogram at all)
double Size () const override
 Get the size of the test (eg. rate of Type I error).
virtual Int_t Sizeof () const
 Return size of the TNamed part of the TObject.
void Streamer (TBuffer &) override
void StreamerNVirtual (TBuffer &ClassDef_StreamerNVirtual_b)
virtual void SysError (const char *method, const char *msgfmt,...) const
 Issue system error message.
Bool_t TestBit (UInt_t f) const
Int_t TestBits (UInt_t f) const
virtual void UseCurrentStyle ()
 Set current style settings in this object This function is called when either TCanvas::UseCurrentStyle or TROOT::ForceStyle have been invoked.
virtual void Warning (const char *method, const char *msgfmt,...) const
 Issue warning message.
virtual Int_t Write (const char *name=nullptr, Int_t option=0, Int_t bufsize=0)
 Write this object to the current directory.
virtual Int_t Write (const char *name=nullptr, Int_t option=0, Int_t bufsize=0) const
 Write this object to the current directory.

Static Public Member Functions

static TClassClass ()
static const char * Class_Name ()
static constexpr Version_t Class_Version ()
static const char * DeclFileName ()
static Longptr_t GetDtorOnly ()
 Return destructor only flag.
static Bool_t GetObjectStat ()
 Get status of object stat flag.
static void SetDtorOnly (void *obj)
 Set destructor only flag.
static void SetObjectStat (Bool_t stat)
 Turn on/off tracking of objects in the TObjectTable.

Protected Types

enum  { kOnlyPrepStep = (1ULL << (3)) }

Protected Member Functions

virtual void DoError (int level, const char *location, const char *fmt, va_list va) const
 Interface to ErrorHandler (protected).
void MakeZombie ()
void SavePrimitiveNameTitle (std::ostream &out, const char *variable_name)
 Save object name and title into the output stream "out".
void SetBins (const RooAbsCollection &coll, Int_t numBins) const
void SetupBasicUsage ()
 Constructor for automatic configuration with basic settings.

Static Protected Member Functions

static void SavePrimitiveConstructor (std::ostream &out, TClass *cl, const char *variable_name, const char *constructor_agrs="", Bool_t empty_line=kTRUE)
 Save object constructor in the output stream "out".
static void SavePrimitiveDraw (std::ostream &out, const char *variable_name, Option_t *option=nullptr)
 Save invocation of primitive Draw() method Skipped if option contains "nodraw" string.
static TString SavePrimitiveVector (std::ostream &out, const char *prefix, Int_t len, Double_t *arr, Int_t flag=0)
 Save array in the output stream "out" as vector.

Protected Attributes

RooArgListfAxes
 which variables to put on each axis
RooArgSet fChainParams
 parameters to store in the chain (if not specified they are all of them )
RooArgSet fConditionalObs
 conditional observables
RooAbsDatafData
 pointer to the data (owned by the workspace)
double fDelta = -1
 acceptable error for Keys cutoffs being equal topCutoff (a) considered == bottomCutoff (b) iff (std::abs(a - b) < std::abs(fDelta * (a + b)/2)); Theoretically, the Abs is not needed here, but floating-point arithmetic does not always work perfectly, and the Abs doesn't hurt
double fEpsilon = -1
 acceptable error for Keys interval determination
RooArgSet fGlobalObs
 global observables
enum MCMCInterval::IntervalType fIntervalType = MCMCInterval::kShortest
double fLeftSideTF = -1
 left side tail-fraction for interval
TString fName
RooArgSet fNuisParams
 nuisance parameters for interval (not really used)
Int_t fNumBins = 0
 set the number of bins to create for each axis when constructing the interval
Int_t fNumBurnInSteps = 0
 number of iterations to discard as burn-in, starting from the first
Int_t fNumIters = 0
 number of iterations to run metropolis algorithm
RooAbsPdffPdf
 pointer to common PDF (owned by the workspace)
RooArgSet fPOI
 parameters of interest for interval
RooAbsPdffPriorPdf
 pointer to prior PDF (owned by the workspace)
ProposalFunctionfPropFunc
 Proposal function for MCMC integration.
double fSize = -1
 size of the test (eg. specified rate of Type I error)
TString fTitle
bool fUseKeys = false
 whether to use kernel estimation to determine interval
bool fUseSparseHist = false
 whether to use sparse histogram (if using hist at all)

Static Private Member Functions

static void AddToTObjectTable (TObject *)
 Private helper function which will dispatch to TObjectTable::AddObj.

Private Attributes

UInt_t fBits
 bit field status word
UInt_t fUniqueID
 object unique identifier

Static Private Attributes

static Longptr_t fgDtorOnly = 0
 object for which to call dtor only (i.e. no delete)
static Bool_t fgObjectStat = kTRUE
 if true keep track of objects in TObjectTable

#include <RooStats/MCMCCalculator.h>

Inheritance diagram for RooStats::MCMCCalculator:
RooStats::IntervalCalculator TNamed TObject

Member Enumeration Documentation

◆ anonymous enum

anonymous enum
protectedinherited
Enumerator
kOnlyPrepStep 

Used to request that the class specific implementation of TObject::Write just prepare the objects to be ready to be written but do not actually write them into the TBuffer.

This is just for example by TBufferMerger to request that the TTree inside the file calls TTree::FlushBaskets (outside of the merging lock) and TBufferMerger will later ask for the write (inside the merging lock). To take advantage of this feature the class needs to overload TObject::Write and use this enum value accordingly. (See TTree::Write and TObject::Write) Do not use, this feature will be migrate to the Merge function (See TClass and TTree::Merge)

Definition at line 106 of file TObject.h.

◆ anonymous enum

anonymous enum
inherited
Enumerator
kSingleKey 

write collection with single key

kOverwrite 

overwrite existing object with same name

kWriteDelete 

write object, then delete previous key with same name

Definition at line 99 of file TObject.h.

◆ anonymous enum

anonymous enum
inherited
Enumerator
kIsOnHeap 

object is on heap

kNotDeleted 

object has not been deleted

kZombie 

object ctor failed

kInconsistent 

class overload Hash but does call RecursiveRemove in destructor

kBitMask 

Definition at line 89 of file TObject.h.

◆ EDeprecatedStatusBits

Enumerator
kObjInCanvas 

for backward compatibility only, use kMustCleanup

Definition at line 84 of file TObject.h.

◆ EStatusBits

enum TObject::EStatusBits
inherited
Enumerator
kCanDelete 

if object in a list can be deleted

kMustCleanup 

if object destructor must call RecursiveRemove()

kIsReferenced 

if object is referenced by a TRef or TRefArray

kHasUUID 

if object has a TUUID (its fUniqueID=UUIDNumber)

kCannotPick 

if object in a pad cannot be picked

kNoContextMenu 

if object does not want context menu

kInvalidObject 

if object ctor succeeded but object should not be used

Definition at line 70 of file TObject.h.

Constructor & Destructor Documentation

◆ MCMCCalculator() [1/2]

MCMCCalculator::MCMCCalculator ( )

default constructor

Definition at line 58 of file MCMCCalculator.cxx.

◆ MCMCCalculator() [2/2]

MCMCCalculator::MCMCCalculator ( RooAbsData & data,
const ModelConfig & model )

Constructor for automatic configuration with basic settings and a ModelConfig.

constructor from a Model Config with a basic settings package configured by SetupBasicUsage()

Uses a UniformProposal, 10,000 iterations, 40 burn in steps, 50 bins for each RooRealVar, determines interval by histogram, and finds a 95% confidence interval. Any of these basic settings can be overridden by calling one of the Set...() methods.

Definition at line 71 of file MCMCCalculator.cxx.

Member Function Documentation

◆ AbstractMethod()

void TObject::AbstractMethod ( const char * method) const
inherited

Call this function within a function that you don't want to define as purely virtual, in order not to force all users deriving from that class to implement that maybe (on their side) unused function; but at the same time, emit a run-time warning if they try to call it, telling that it is not implemented in the derived class: action must thus be taken on the user side to override it.

In other word, this method acts as a "runtime purely virtual" warning instead of a "compiler purely virtual" error.

Warning
This interface is a legacy function that is no longer recommended to be used by new development code.
Note
The name "AbstractMethod" does not imply that it's an abstract method in the strict C++ sense.

Definition at line 1149 of file TObject.cxx.

◆ AddToTObjectTable()

void TObject::AddToTObjectTable ( TObject * op)
staticprivateinherited

Private helper function which will dispatch to TObjectTable::AddObj.

Included here to avoid circular dependency between header files.

Definition at line 195 of file TObject.cxx.

◆ AppendPad()

void TObject::AppendPad ( Option_t * option = "")
virtualinherited

Append graphics object to current pad.

In case no current pad is set yet, create a default canvas with the name "c1".

Definition at line 204 of file TObject.cxx.

◆ Browse()

◆ CheckedHash()

ULong_t TObject::CheckedHash ( )
inlineinherited

Check and record whether this class has a consistent Hash/RecursiveRemove setup (*) and then return the regular Hash value for this object.

The intent is for this routine to be called instead of directly calling the function Hash during "insert" operations. See TObject::HasInconsistenTObjectHash();

(*) The setup is consistent when all classes in the class hierarchy that overload TObject::Hash do call ROOT::CallRecursiveRemoveIfNeeded in their destructor. i.e. it is safe to call the Hash virtual function during the RecursiveRemove operation.

Definition at line 332 of file TObject.h.

◆ Class()

TClass * RooStats::MCMCCalculator::Class ( )
static
Returns
TClass describing this class

◆ Class_Name()

const char * RooStats::MCMCCalculator::Class_Name ( )
static
Returns
Name of this class

◆ Class_Version()

constexpr Version_t RooStats::MCMCCalculator::Class_Version ( )
inlinestaticconstexpr
Returns
Version of this class

Definition at line 204 of file MCMCCalculator.h.

◆ ClassName()

const char * TObject::ClassName ( ) const
virtualinherited

Returns name of class to which the object belongs.

Definition at line 227 of file TObject.cxx.

◆ Clear()

void TNamed::Clear ( Option_t * option = "")
overridevirtualinherited

Set name and title to empty strings ("").

Reimplemented from TObject.

Reimplemented in TPrincipal, TProcessID, TStreamerInfo, TTask, TVirtualFitter, and TVirtualStreamerInfo.

Definition at line 63 of file TNamed.cxx.

◆ Clone()

TObject * TNamed::Clone ( const char * newname = "") const
overridevirtualinherited

Make a clone of an object using the Streamer facility.

If newname is specified, this will be the name of the new object.

Reimplemented from TObject.

Reimplemented in TStreamerInfo, and TTreeIndex.

Definition at line 73 of file TNamed.cxx.

◆ Compare()

Int_t TNamed::Compare ( const TObject * obj) const
overridevirtualinherited

Compare two TNamed objects.

Returns 0 when equal, -1 when this is smaller and +1 when bigger (like strcmp).

Reimplemented from TObject.

Reimplemented in TStructNodeProperty.

Definition at line 84 of file TNamed.cxx.

◆ ConfidenceLevel()

double RooStats::MCMCCalculator::ConfidenceLevel ( ) const
inlineoverridevirtual

Get the Confidence level for the test.

Implements RooStats::IntervalCalculator.

Definition at line 50 of file MCMCCalculator.h.

◆ Copy()

void TNamed::Copy ( TObject & named) const
overridevirtualinherited

Copy this to obj.

Reimplemented from TObject.

Reimplemented in TPieSlice, TProfile2D, TProfile3D, TProfile, TStyle, TSystemDirectory, TSystemFile, TText, and TXTRU.

Definition at line 93 of file TNamed.cxx.

◆ DeclFileName()

const char * RooStats::MCMCCalculator::DeclFileName ( )
inlinestatic
Returns
Name of the file containing the class declaration

Definition at line 204 of file MCMCCalculator.h.

◆ Delete()

void TObject::Delete ( Option_t * option = "")
virtualinherited

◆ DistancetoPrimitive()

◆ DoError()

void TObject::DoError ( int level,
const char * location,
const char * fmt,
va_list va ) const
protectedvirtualinherited

Interface to ErrorHandler (protected).

Reimplemented in TThread, and TTreeViewer.

Definition at line 1059 of file TObject.cxx.

◆ Draw()

◆ DrawClass()

void TObject::DrawClass ( ) const
virtualinherited

Draw class inheritance tree of the class to which this object belongs.

If a class B inherits from a class A, description of B is drawn on the right side of description of A. Member functions overridden by B are shown in class A with a blue line crossing-out the corresponding member function. The following picture is the class inheritance tree of class TPaveLabel:

Reimplemented in TGFrame, TSystemDirectory, and TSystemFile.

Definition at line 308 of file TObject.cxx.

◆ DrawClone()

TObject * TObject::DrawClone ( Option_t * option = "") const
virtualinherited

Draw a clone of this object in the current selected pad with: gROOT->SetSelectedPad(c1).

If pad was not selected - gPad will be used.

Note
For histograms, use the more specialised TH1::DrawCopy().

Reimplemented in TAxis, TCanvas, TGFrame, TSystemDirectory, and TSystemFile.

Definition at line 319 of file TObject.cxx.

◆ Dump()

void TObject::Dump ( ) const
virtualinherited

Dump contents of object on stdout.

Using the information in the object dictionary (class TClass) each data member is interpreted. If a data member is a pointer, the pointer value is printed

The following output is the Dump of a TArrow object:

fAngle 0 Arrow opening angle (degrees)
fArrowSize 0.2 Arrow Size
fOption.*fData
fX1 0.1 X of 1st point
fY1 0.15 Y of 1st point
fX2 0.67 X of 2nd point
fY2 0.83 Y of 2nd point
fUniqueID 0 object unique identifier
fBits 50331648 bit field status word
fLineColor 1 line color
fLineStyle 1 line style
fLineWidth 1 line width
fFillColor 19 fill area color
fFillStyle 1001 fill area style
#define X(type, name)
RooAbsData * fData
pointer to the data (owned by the workspace)
double Size() const override
Get the size of the test (eg. rate of Type I error).
UInt_t fUniqueID
object unique identifier
Definition TObject.h:46
UInt_t fBits
bit field status word
Definition TObject.h:47
TLine * line
TCanvas * style()
Definition style.C:1

Reimplemented in TClass, TCollection, TGFrame, TGPack, and TSystemFile.

Definition at line 367 of file TObject.cxx.

◆ Error()

void TObject::Error ( const char * location,
const char * fmt,
... ) const
virtualinherited

Issue error message.

Use "location" to specify the method where the error occurred. Accepts standard printf formatting arguments.

Reimplemented in TFitResult.

Definition at line 1098 of file TObject.cxx.

◆ Execute() [1/2]

void TObject::Execute ( const char * method,
const char * params,
Int_t * error = nullptr )
virtualinherited

Execute method on this object with the given parameter string, e.g.

"3.14,1,\"text\"".

Reimplemented in ROOT::R::TRInterface, TCling, TContextMenu, TInterpreter, and TMethodCall.

Definition at line 378 of file TObject.cxx.

◆ Execute() [2/2]

void TObject::Execute ( TMethod * method,
TObjArray * params,
Int_t * error = nullptr )
virtualinherited

Execute method on this object with parameters stored in the TObjArray.

The TObjArray should contain an argv vector like:

argv[0] ... argv[n] = the list of TObjString parameters
Collectable string class.
Definition TObjString.h:28
const Int_t n
Definition legend1.C:16

Reimplemented in ROOT::R::TRInterface, TCling, TContextMenu, TInterpreter, and TMethodCall.

Definition at line 398 of file TObject.cxx.

◆ ExecuteEvent()

◆ Fatal()

void TObject::Fatal ( const char * location,
const char * fmt,
... ) const
virtualinherited

Issue fatal error message.

Use "location" to specify the method where the fatal error occurred. Accepts standard printf formatting arguments.

Definition at line 1126 of file TObject.cxx.

◆ FillBuffer()

void TNamed::FillBuffer ( char *& buffer)
virtualinherited

Encode TNamed into output buffer.

Reimplemented in TDirectoryFile, TFile, TKey, TKeySQL, TKeyXML, TSQLFile, and TXMLFile.

Definition at line 103 of file TNamed.cxx.

◆ FindObject() [1/2]

TObject * TObject::FindObject ( const char * name) const
virtualinherited

Must be redefined in derived classes.

This function is typically used with TCollections, but can also be used to find an object by name inside this object.

Reimplemented in RooAbsCollection, RooLinkedList, TBtree, TCollection, TDirectory, TFolder, TGeometry, TGraph2D, TGraph, TH1, THashList, THashTable, THbookFile, TList, TListOfDataMembers, TListOfEnums, TListOfEnumsWithLock, TListOfFunctions, TListOfFunctionTemplates, TListOfTypes, TMap, TObjArray, TPad, TROOT, TViewPubDataMembers, and TViewPubFunctions.

Definition at line 425 of file TObject.cxx.

◆ FindObject() [2/2]

TObject * TObject::FindObject ( const TObject * obj) const
virtualinherited

Must be redefined in derived classes.

This function is typically used with TCollections, but can also be used to find an object inside this object.

Reimplemented in RooAbsCollection, RooLinkedList, TBtree, TCollection, TDirectory, TFolder, TGeometry, TGraph2D, TGraph, TH1, THashList, THashTable, THbookFile, TList, TListOfDataMembers, TListOfEnums, TListOfEnumsWithLock, TListOfFunctions, TListOfFunctionTemplates, TListOfTypes, TMap, TObjArray, TPad, TROOT, TViewPubDataMembers, and TViewPubFunctions.

Definition at line 435 of file TObject.cxx.

◆ GetDrawOption()

Option_t * TObject::GetDrawOption ( ) const
virtualinherited

Get option used by the graphics system to draw this object.

Note that before calling object.GetDrawOption(), you must have called object.Draw(..) before in the current pad.

Reimplemented in TBrowser, TFitEditor, TGedFrame, TGFileBrowser, TRootBrowser, and TRootBrowserLite.

Definition at line 445 of file TObject.cxx.

◆ GetDtorOnly()

Longptr_t TObject::GetDtorOnly ( )
staticinherited

Return destructor only flag.

Definition at line 1196 of file TObject.cxx.

◆ GetIconName()

const char * TObject::GetIconName ( ) const
virtualinherited

Returns mime type name of object.

Used by the TBrowser (via TGMimeTypes class). Override for class of which you would like to have different icons for objects of the same class.

Reimplemented in ROOT::Experimental::XRooFit::xRooNode, TASImage, TBranch, TBranchElement, TGeoVolume, TGMainFrame, TKey, TMethodBrowsable, TSystemFile, and TVirtualBranchBrowsable.

Definition at line 472 of file TObject.cxx.

◆ GetInterval()

MCMCInterval * MCMCCalculator::GetInterval ( ) const
overridevirtual

Main interface to get a ConfInterval.

Main interface to get a RooStats::ConfInterval.

Implements RooStats::IntervalCalculator.

Definition at line 138 of file MCMCCalculator.cxx.

◆ GetName()

const char * TNamed::GetName ( ) const
inlineoverridevirtualinherited

Returns name of object.

This default method returns the class name. Classes that give objects a name should override this method.

Reimplemented from TObject.

Definition at line 49 of file TNamed.h.

◆ GetObjectInfo()

char * TObject::GetObjectInfo ( Int_t px,
Int_t py ) const
virtualinherited

Returns string containing info about the object at position (px,py).

This method is typically overridden by classes of which the objects can report peculiarities for different positions. Returned string will be re-used (lock in MT environment).

Reimplemented in TASImage, TAxis3D, TColorWheel, TF1, TF2, TFileDrawMap, TGeoNode, TGeoTrack, TGeoVolume, TGL5DDataSet, TGLHistPainter, TGLParametricEquation, TGLTH3Composition, TGraph, TH1, THistPainter, TNode, TPaletteAxis, TParallelCoordVar, and TVirtualHistPainter.

Definition at line 491 of file TObject.cxx.

◆ GetObjectStat()

Bool_t TObject::GetObjectStat ( )
staticinherited

Get status of object stat flag.

Definition at line 1181 of file TObject.cxx.

◆ GetOption()

virtual Option_t * TObject::GetOption ( ) const
inlinevirtualinherited

◆ GetTitle()

const char * TNamed::GetTitle ( ) const
inlineoverridevirtualinherited

Returns title of object.

This default method returns the class title (i.e. description). Classes that give objects a title should override this method.

Reimplemented from TObject.

Definition at line 50 of file TNamed.h.

◆ GetUniqueID()

UInt_t TObject::GetUniqueID ( ) const
virtualinherited

Return the unique object id.

Definition at line 480 of file TObject.cxx.

◆ HandleTimer()

Bool_t TObject::HandleTimer ( TTimer * timer)
virtualinherited

Execute action in response of a timer timing out.

This method must be overridden if an object has to react to timers.

Reimplemented in TGCommandPlugin, TGDNDManager, TGFileContainer, TGHtml, TGLEventHandler, TGPopupMenu, TGraphTime, TGScrollBar, TGShutter, TGTextEdit, TGTextEditor, TGTextEntry, TGTextView, TGToolTip, TGuiBldDragManager, TGWindow, and TTreeViewer.

Definition at line 516 of file TObject.cxx.

◆ Hash()

ULong_t TNamed::Hash ( ) const
inlineoverridevirtualinherited

Return hash value for this object.

Note: If this routine is overloaded in a derived class, this derived class should also add

void CallRecursiveRemoveIfNeeded(TObject &obj)
call RecursiveRemove for obj if gROOT is valid and obj.TestBit(kMustCleanup) is true.
Definition TROOT.h:406

Otherwise, when RecursiveRemove is called (by ~TObject or example) for this type of object, the transversal of THashList and THashTable containers will will have to be done without call Hash (and hence be linear rather than logarithmic complexity). You will also see warnings like

Error in <ROOT::Internal::TCheckHashRecursiveRemoveConsistency::CheckRecursiveRemove>: The class SomeName overrides
TObject::Hash but does not call TROOT::RecursiveRemove in its destructor.
ULong_t Hash() const override
Return hash value for this object.
Definition TNamed.h:51
virtual void Error(const char *method, const char *msgfmt,...) const
Issue error message.
Definition TObject.cxx:1098
TObject()
TObject constructor.
Definition TObject.h:259
void RecursiveRemove(TObject *obj) override
Recursively remove this object from the list of Cleanups.
Definition TROOT.cxx:2651

Reimplemented from TObject.

Definition at line 51 of file TNamed.h.

◆ HasInconsistentHash()

Bool_t TObject::HasInconsistentHash ( ) const
inlineinherited

Return true is the type of this object is known to have an inconsistent setup for Hash and RecursiveRemove (i.e.

missing call to RecursiveRemove in destructor).

Note: Since the consistency is only tested for during inserts, this routine will return true for object that have never been inserted whether or not they have a consistent setup. This has no negative side-effect as searching for the object with the right or wrong Hash will always yield a not-found answer (Since anyway no hash can be guaranteed unique, there is always a check)

Definition at line 366 of file TObject.h.

◆ Info()

void TObject::Info ( const char * location,
const char * fmt,
... ) const
virtualinherited

Issue info message.

Use "location" to specify the method where the warning occurred. Accepts standard printf formatting arguments.

Definition at line 1072 of file TObject.cxx.

◆ InheritsFrom() [1/2]

Bool_t TObject::InheritsFrom ( const char * classname) const
virtualinherited

Returns kTRUE if object inherits from class "classname".

Reimplemented in TClass.

Definition at line 549 of file TObject.cxx.

◆ InheritsFrom() [2/2]

Bool_t TObject::InheritsFrom ( const TClass * cl) const
virtualinherited

Returns kTRUE if object inherits from TClass cl.

Reimplemented in TClass.

Definition at line 557 of file TObject.cxx.

◆ Inspect()

void TObject::Inspect ( ) const
virtualinherited

Dump contents of this object in a graphics canvas.

Same action as Dump but in a graphical form. In addition pointers to other objects can be followed.

The following picture is the Inspect of a histogram object:

Reimplemented in ROOT::Experimental::XRooFit::xRooNode, TGFrame, TInspectorObject, and TSystemFile.

Definition at line 570 of file TObject.cxx.

◆ InvertBit()

void TObject::InvertBit ( UInt_t f)
inlineinherited

Definition at line 206 of file TObject.h.

◆ IsA()

TClass * RooStats::MCMCCalculator::IsA ( ) const
inlineoverridevirtual
Returns
TClass describing current object

Reimplemented from RooStats::IntervalCalculator.

Definition at line 204 of file MCMCCalculator.h.

◆ IsDestructed()

Bool_t TObject::IsDestructed ( ) const
inlineinherited

IsDestructed.

Note
This function must be non-virtual as it can be used on destructed (but not yet modified) memory. This is used for example in TClonesArray to record the element that have been destructed but not deleted and thus are ready for re-use (by operator new with placement).
Returns
true if this object's destructor has been run.

Definition at line 186 of file TObject.h.

◆ IsEqual()

Bool_t TObject::IsEqual ( const TObject * obj) const
virtualinherited

Default equal comparison (objects are equal if they have the same address in memory).

More complicated classes might want to override this function.

Reimplemented in TGObject, TObjString, TPair, and TQCommand.

Definition at line 589 of file TObject.cxx.

◆ IsFolder()

◆ IsOnHeap()

Bool_t TObject::IsOnHeap ( ) const
inlineinherited

Definition at line 160 of file TObject.h.

◆ IsSortable()

Bool_t TNamed::IsSortable ( ) const
inlineoverridevirtualinherited

Reimplemented from TObject.

Reimplemented in TStructNodeProperty.

Definition at line 52 of file TNamed.h.

◆ IsZombie()

Bool_t TObject::IsZombie ( ) const
inlineinherited

Definition at line 161 of file TObject.h.

◆ ls()

void TNamed::ls ( Option_t * option = "") const
overridevirtualinherited

List TNamed name and title.

Reimplemented from TObject.

Reimplemented in ROOT::Experimental::XRooFit::xRooBrowser, TNode, TROOT, TStreamerBase, TStreamerElement, TStreamerInfo, TStreamerSTL, TTask, TText, and TVirtualStreamerInfo.

Definition at line 112 of file TNamed.cxx.

◆ MakeZombie()

void TObject::MakeZombie ( )
inlineprotectedinherited

Definition at line 55 of file TObject.h.

◆ MayNotUse()

void TObject::MayNotUse ( const char * method) const
inherited

Use this method to signal that a method (defined in a base class) may not be called in a derived class (in principle against good design since a child class should not provide less functionality than its parent, however, sometimes it is necessary).

Definition at line 1160 of file TObject.cxx.

◆ Notify()

Bool_t TObject::Notify ( )
virtualinherited

This method must be overridden to handle object notification (the base implementation is no-op).

Different objects in ROOT use the Notify method for different purposes, in coordination with other objects that call this method at the appropriate time.

For example, TLeaf uses it to load class information; TBranchRef to load contents of referenced branches TBranchRef; most notably, based on Notify, TChain implements a callback mechanism to inform interested parties when it switches to a new sub-tree.

Reimplemented in h1analysis, h1analysisTreeReader, TARInterruptHandler, TASInputHandler, TASInterruptHandler, TASLogHandler, TASSigPipeHandler, TBlinkTimer, TBranchElement, TBranchRef, TBreakLineCom, TBrowserTimer, TCollection, TDelCharCom, TDelTextCom, TFileHandler, TGContainerKeyboardTimer, TGContainerScrollTimer, TGInputHandler, TGLRedrawTimer, TGTextEditHist, TGuiBldDragManagerRepeatTimer, TIdleTimer, TInsCharCom, TInsTextCom, TInterruptHandler, TLeafObject, TMessageHandler, TNotifyLink< Type >, TNotifyLink< RNoCleanupNotifierHelper >, TNotifyLink< ROOT::Detail::TBranchProxy >, TNotifyLink< TTreeReader >, TPopupDelayTimer, TProcessEventTimer, TRefTable, TRepeatTimer, TSBRepeatTimer, TSelector, TSelectorDraw, TSelectorEntries, TSignalHandler, TSingleShotCleaner, TSocketHandler, TStdExceptionHandler, TSysEvtHandler, TTermInputHandler, TThreadTimer, TTimeOutTimer, TTimer, TTipDelayTimer, TTree, TTreeFormula, TTreeFormulaManager, TTreeReader, TViewTimer, and TViewUpdateTimer.

Definition at line 618 of file TObject.cxx.

◆ Obsolete()

void TObject::Obsolete ( const char * method,
const char * asOfVers,
const char * removedFromVers ) const
inherited

Use this method to declare a method obsolete.

Specify as of which version the method is obsolete and as from which version it will be removed.

Definition at line 1169 of file TObject.cxx.

◆ operator delete() [1/3]

void TObject::operator delete ( void * ptr,
size_t size )
inherited

Operator delete for sized deallocation.

Definition at line 1234 of file TObject.cxx.

◆ operator delete() [2/3]

void TObject::operator delete ( void * ptr)
inherited

Operator delete.

Definition at line 1212 of file TObject.cxx.

◆ operator delete() [3/3]

void TObject::operator delete ( void * ptr,
void * vp )
inherited

Only called by placement new when throwing an exception.

Definition at line 1266 of file TObject.cxx.

◆ operator delete[]() [1/3]

void TObject::operator delete[] ( void * ptr,
size_t size )
inherited

Operator delete [] for sized deallocation.

Definition at line 1245 of file TObject.cxx.

◆ operator delete[]() [2/3]

void TObject::operator delete[] ( void * ptr)
inherited

Operator delete [].

Definition at line 1223 of file TObject.cxx.

◆ operator delete[]() [3/3]

void TObject::operator delete[] ( void * ptr,
void * vp )
inherited

Only called by placement new[] when throwing an exception.

Definition at line 1274 of file TObject.cxx.

◆ operator new() [1/2]

void * TObject::operator new ( size_t sz)
inlineinherited

Definition at line 189 of file TObject.h.

◆ operator new() [2/2]

void * TObject::operator new ( size_t sz,
void * vp )
inlineinherited

Definition at line 191 of file TObject.h.

◆ operator new[]() [1/2]

void * TObject::operator new[] ( size_t sz)
inlineinherited

Definition at line 190 of file TObject.h.

◆ operator new[]() [2/2]

void * TObject::operator new[] ( size_t sz,
void * vp )
inlineinherited

Definition at line 192 of file TObject.h.

◆ Paint()

void TObject::Paint ( Option_t * option = "")
virtualinherited

This method must be overridden if a class wants to paint itself.

The difference between Paint() and Draw() is that when a object draws itself it is added to the display list of the pad in which it is drawn (and automatically redrawn whenever the pad is redrawn). While paint just draws the object without adding it to the pad display list.

Reimplemented in ROOT::Experimental::RTreeMapPainter, ROOT::RGeoPainter, TAnnotation, TArrow, TASImage, TASPaletteEditor::LimitLine, TASPaletteEditor::PaintPalette, TAxis3D, TBits, TBox, TButton, TCanvas, TClassTree, TCollection, TColorWheel, TCrown, TDiamond, TDirectory, TEfficiency, TEllipse, TEveArrow, TEveCaloViz, TEveDigitSet, TEveGeoShape, TEveGeoTopNode, TEvePlot3D, TEvePointSet, TEveProjectionAxes, TEveScene, TEveShape, TEveStraightLineSet, TEveText, TEveTriangleSet, TExec, TF1, TF2, TF3, TFile, TFileDrawMap, TFrame, TGaxis, TGenerator, TGeoBoolNode, TGeoIntersection, TGeoNode, TGeoOverlap, TGeoPainter, TGeoPhysicalNode, TGeoShape, TGeoSubtraction, TGeoTrack, TGeoUnion, TGeoVGShape, TGeoVolume, TGL5DDataSet, TGLHistPainter, TGLParametricEquation, TGLTH3Composition, TGraph2D, TGraph2DPainter, TGraph, TGraphEdge, TGraphNode, TGraphPolargram, TGraphTime, TH1, THistPainter, THStack, TLatex, TLegend, TLine, TMacro, TMarker3DBox, TMarker, TMathText, TMultiGraph, TNode, TNodeDiv, TPad, TPaletteAxis, TParallelCoord, TParallelCoordRange, TParallelCoordVar, TParticle, TPave, TPaveLabel, TPaveStats, TPavesText, TPaveText, TPie, TPolyLine3D, TPolyLine, TPolyMarker3D, TPolyMarker, TPrimary, TRatioPlot, TScatter2D, TScatter, TShape, TSpectrum2Painter, TSpider, TSpline, TSQLFile, TStyle, TText, TTreePerfStats, TVirtualGeoPainter, TVirtualGeoTrack, TVirtualHistPainter, TVirtualPad, TWbox, and TXMLFile.

Definition at line 631 of file TObject.cxx.

◆ Pop()

void TObject::Pop ( )
virtualinherited

Pop on object drawn in a pad to the top of the display list.

I.e. it will be drawn last and on top of all other primitives.

Reimplemented in TFrame, TPad, and TVirtualPad.

Definition at line 640 of file TObject.cxx.

◆ Print()

◆ Read()

Int_t TObject::Read ( const char * name)
virtualinherited

Read contents of object with specified name from the current directory.

First the key with the given name is searched in the current directory, next the key buffer is deserialized into the object. The object must have been created before via the default constructor. See TObject::Write().

Reimplemented in TBuffer, TKey, TKeySQL, and TKeyXML.

Definition at line 673 of file TObject.cxx.

◆ RecursiveRemove()

◆ ResetBit()

void TObject::ResetBit ( UInt_t f)
inlineinherited

Definition at line 203 of file TObject.h.

◆ SaveAs()

void TObject::SaveAs ( const char * filename = "",
Option_t * option = "" ) const
virtualinherited

Save this object in the file specified by filename.

  • if "filename" contains ".root" the object is saved in filename as root binary file.
  • if "filename" contains ".xml" the object is saved in filename as a xml ascii file.
  • if "filename" contains ".cc" the object is saved in filename as C code independent from ROOT. The code is generated via SavePrimitive(). Specific code should be implemented in each object to handle this option. Like in TF1::SavePrimitive().
  • otherwise the object is written to filename as a CINT/C++ script. The C++ code to rebuild this object is generated via SavePrimitive(). The "option" parameter is passed to SavePrimitive. By default it is an empty string. It can be used to specify the Draw option in the code generated by SavePrimitive.

    The function is available via the object context menu.

Reimplemented in ROOT::Experimental::XRooFit::xRooNode, TClassTree, TFolder, TGeoVolume, TGObject, TGraph, TH1, TPad, TPaveClass, TSpline3, TSpline5, TSpline, TTreePerfStats, and TVirtualPad.

Definition at line 708 of file TObject.cxx.

◆ SavePrimitive()

void TObject::SavePrimitive ( std::ostream & out,
Option_t * option = "" )
virtualinherited

Save a primitive as a C++ statement(s) on output stream "out".

Reimplemented in TAnnotation, TArc, TArrow, TASImage, TAxis3D, TBox, TButton, TCanvas, TChain, TCrown, TCurlyArc, TCurlyLine, TCutG, TDiamond, TEfficiency, TEllipse, TExec, TF12, TF1, TF2, TF3, TFrame, TGaxis, TGButton, TGButtonGroup, TGCanvas, TGCheckButton, TGColorSelect, TGColumnLayout, TGComboBox, TGCompositeFrame, TGContainer, TGDockableFrame, TGDoubleHSlider, TGDoubleVSlider, TGedMarkerSelect, TGedPatternSelect, TGeoArb8, TGeoBBox, TGeoBoolNode, TGeoCombiTrans, TGeoCompositeShape, TGeoCone, TGeoConeSeg, TGeoCtub, TGeoDecayChannel, TGeoElementRN, TGeoEltu, TGeoGtra, TGeoHalfSpace, TGeoHMatrix, TGeoHype, TGeoIdentity, TGeoIntersection, TGeoMaterial, TGeoMedium, TGeoMixture, TGeoPara, TGeoParaboloid, TGeoPatternCylPhi, TGeoPatternCylR, TGeoPatternParaX, TGeoPatternParaY, TGeoPatternParaZ, TGeoPatternSphPhi, TGeoPatternSphR, TGeoPatternSphTheta, TGeoPatternTrapZ, TGeoPatternX, TGeoPatternY, TGeoPatternZ, TGeoPcon, TGeoPgon, TGeoRotation, TGeoScaledShape, TGeoShapeAssembly, TGeoSphere, TGeoSubtraction, TGeoTessellated, TGeoTorus, TGeoTranslation, TGeoTrap, TGeoTrd1, TGeoTrd2, TGeoTube, TGeoTubeSeg, TGeoUnion, TGeoVolume, TGeoXtru, TGFileContainer, TGFont, TGFrame, TGFSComboBox, TGGC, TGGroupFrame, TGHButtonGroup, TGHorizontal3DLine, TGHorizontalFrame, TGHorizontalLayout, TGHProgressBar, TGHScrollBar, TGHSlider, TGHSplitter, TGHtml, TGIcon, TGLabel, TGLayoutHints, TGLineStyleComboBox, TGLineWidthComboBox, TGListBox, TGListDetailsLayout, TGListLayout, TGListTree, TGListView, TGLVContainer, TGMainFrame, TGMatrixLayout, TGMdiFrame, TGMdiMainFrame, TGMdiMenuBar, TGMenuBar, TGMenuTitle, TGNumberEntry, TGNumberEntryField, TGPictureButton, TGPopupMenu, TGProgressBar, TGRadioButton, TGraph2D, TGraph2DAsymmErrors, TGraph2DErrors, TGraph, TGraphAsymmErrors, TGraphBentErrors, TGraphEdge, TGraphErrors, TGraphMultiErrors, TGraphNode, TGraphPolar, TGraphPolargram, TGraphStruct, TGroupButton, TGRowLayout, TGShapedFrame, TGShutter, TGShutterItem, TGSplitFrame, TGStatusBar, TGTab, TGTabLayout, TGTableLayout, TGTableLayoutHints, TGTextButton, TGTextEdit, TGTextEntry, TGTextLBEntry, TGTextView, TGTileLayout, TGToolBar, TGTransientFrame, TGTripleHSlider, TGTripleVSlider, TGVButtonGroup, TGVertical3DLine, TGVerticalFrame, TGVerticalLayout, TGVFileSplitter, TGVProgressBar, TGVScrollBar, TGVSlider, TGVSplitter, TGXYLayout, TGXYLayoutHints, TH1, TH2Poly, THelix, THStack, TLatex, TLegend, TLine, TMacro, TMarker3DBox, TMarker, TMathText, TMultiGraph, TPad, TPaletteAxis, TParallelCoord, TParallelCoordVar, TPave, TPaveClass, TPaveLabel, TPaveStats, TPavesText, TPaveText, TPie, TPieSlice, TPolyLine3D, TPolyLine, TPolyMarker3D, TPolyMarker, TProfile2D, TProfile3D, TProfile, TRootContainer, TRootEmbeddedCanvas, TScatter2D, TScatter, TSlider, TSliderBox, TSpline3, TSpline5, TStyle, TText, TTreePerfStats, and TWbox.

Definition at line 858 of file TObject.cxx.

◆ SavePrimitiveConstructor()

void TObject::SavePrimitiveConstructor ( std::ostream & out,
TClass * cl,
const char * variable_name,
const char * constructor_agrs = "",
Bool_t empty_line = kTRUE )
staticprotectedinherited

Save object constructor in the output stream "out".

Can be used as first statement when implementing SavePrimitive() method for the object

Definition at line 777 of file TObject.cxx.

◆ SavePrimitiveDraw()

void TObject::SavePrimitiveDraw ( std::ostream & out,
const char * variable_name,
Option_t * option = nullptr )
staticprotectedinherited

Save invocation of primitive Draw() method Skipped if option contains "nodraw" string.

Definition at line 845 of file TObject.cxx.

◆ SavePrimitiveNameTitle()

void TNamed::SavePrimitiveNameTitle ( std::ostream & out,
const char * variable_name )
protectedinherited

Save object name and title into the output stream "out".

Definition at line 135 of file TNamed.cxx.

◆ SavePrimitiveVector()

TString TObject::SavePrimitiveVector ( std::ostream & out,
const char * prefix,
Int_t len,
Double_t * arr,
Int_t flag = 0 )
staticprotectedinherited

Save array in the output stream "out" as vector.

Create unique variable name based on prefix value Returns name of vector which can be used in constructor or in other places of C++ code If flag === kTRUE, just add empty line If flag === 111, check if array is empty and return nullptr or <vectorname>.data()

Definition at line 796 of file TObject.cxx.

◆ SetAxes()

virtual void RooStats::MCMCCalculator::SetAxes ( RooArgList & axes)
inlinevirtual

set which variables to put on each axis

Definition at line 103 of file MCMCCalculator.h.

◆ SetBins()

void RooStats::MCMCCalculator::SetBins ( const RooAbsCollection & coll,
Int_t numBins ) const
inlineprotected

Definition at line 195 of file MCMCCalculator.h.

◆ SetBit() [1/2]

void TObject::SetBit ( UInt_t f)
inlineinherited

Definition at line 202 of file TObject.h.

◆ SetBit() [2/2]

void TObject::SetBit ( UInt_t f,
Bool_t set )
inherited

Set or unset the user status bits as specified in f.

Definition at line 888 of file TObject.cxx.

◆ SetChainParameters()

virtual void RooStats::MCMCCalculator::SetChainParameters ( const RooArgSet & set)
inlinevirtual

specify the parameters to store in the Markov chain By default all the parameters are stored

Definition at line 68 of file MCMCCalculator.h.

◆ SetConditionalObservables()

virtual void RooStats::MCMCCalculator::SetConditionalObservables ( const RooArgSet & set)
inlinevirtual

set the conditional observables which will be used when creating the NLL so the pdf's will not be normalized on the conditional observables when computing the NLL

Definition at line 75 of file MCMCCalculator.h.

◆ SetConfidenceLevel()

void RooStats::MCMCCalculator::SetConfidenceLevel ( double cl)
inlineoverridevirtual

set the confidence level for the interval (eg. 0.95 for a 95% Confidence Interval)

Implements RooStats::IntervalCalculator.

Definition at line 85 of file MCMCCalculator.h.

◆ SetData()

void RooStats::MCMCCalculator::SetData ( RooAbsData & data)
inlineoverridevirtual

Set the DataSet if not already there.

Implements RooStats::IntervalCalculator.

Definition at line 55 of file MCMCCalculator.h.

◆ SetDrawOption()

void TObject::SetDrawOption ( Option_t * option = "")
virtualinherited

Set drawing option for object.

This option only affects the drawing style and is stored in the option field of the TObjOptLink supporting a TPad's primitive list (TList). Note that it does not make sense to call object.SetDrawOption(option) before having called object.Draw().

Reimplemented in RooPlot, TAxis, TBrowser, TGedFrame, TGFrame, TPad, TPaveStats, TRootBrowserLite, TSystemDirectory, and TSystemFile.

Definition at line 871 of file TObject.cxx.

◆ SetDtorOnly()

void TObject::SetDtorOnly ( void * obj)
staticinherited

Set destructor only flag.

Definition at line 1204 of file TObject.cxx.

◆ SetGlobalObservables()

virtual void RooStats::MCMCCalculator::SetGlobalObservables ( const RooArgSet & set)
inlinevirtual

set the global observables which will be used when creating the NLL so the constraint pdf's will be normalized correctly on the global observables when computing the NLL

Definition at line 79 of file MCMCCalculator.h.

◆ SetIntervalType()

virtual void RooStats::MCMCCalculator::SetIntervalType ( enum MCMCInterval::IntervalType intervalType)
inlinevirtual

set what type of interval to have the MCMCInterval represent

Definition at line 112 of file MCMCCalculator.h.

◆ SetKeysConfidenceAccuracy()

virtual void RooStats::MCMCCalculator::SetKeysConfidenceAccuracy ( double epsilon)
inlinevirtual

Set the left side tail fraction.

This will automatically configure the MCMCInterval to find a tail-fraction interval. Note: that `a' must be in the range 0 <= a <= 1 or the user will be notified of the error */ virtual void SetLeftSideTailFraction(double a);

/** Set the desired level of confidence-level accuracy for Keys interval determination. When determining the cutoff PDF height that gives the desired confidence level (C_d), the algorithm will consider acceptable any found confidence level c such that Abs(c - C_d) < epsilon.

Any value of this "epsilon" > 0 is considered acceptable, though it is advisable to not use a value too small, because the integration of the Keys PDF sometimes does not have extremely high accuracy.

Definition at line 131 of file MCMCCalculator.h.

◆ SetKeysTerminationThreshold()

virtual void RooStats::MCMCCalculator::SetKeysTerminationThreshold ( double delta)
inlinevirtual

When the shortest interval using Keys PDF could not be found to have the desired confidence level +/- the accuracy (see SetKeysConfidenceAccuracy()), the interval determination algorithm will have to terminate with an unsatisfactory confidence level when the bottom and top of the cutoff search range are very close to being equal.

This scenario comes into play when there seems to be an error in the accuracy of the Keys PDF integration, so the search range continues to shrink without converging to a cutoff value that will give an acceptable confidence level. To choose how small to allow the search range to be before terminating, set the fraction delta such that the search will terminate when topCutoff (a) and bottomCutoff (b) satisfy this condition:

std::abs(a - b) < std::abs(delta * (a + b)/2)

Definition at line 155 of file MCMCCalculator.h.

◆ SetModel()

void MCMCCalculator::SetModel ( const ModelConfig & )
overridevirtual

Set the Model.

Implements RooStats::IntervalCalculator.

Definition at line 80 of file MCMCCalculator.cxx.

◆ SetName()

void TNamed::SetName ( const char * name)
virtualinherited

Set the name of the TNamed.

WARNING: if the object is a member of a THashTable or THashList container the container must be Rehash()'ed after SetName(). For example the list of objects in the current directory is a THashList.

Reimplemented in RooAbsArg, RooAbsData, RooDataHist, RooDataSet, RooFitResult, RooPlot, ROOT::Experimental::XRooFit::xRooNode, TChain, TColor, TDirectory, TEfficiency, TEventList, TEveScene, TFormula, TGraph2D, TGraph, TH1, TNode, TRotMatrix, TShape, TSystemDirectory, TSystemFile, and TTree.

Definition at line 149 of file TNamed.cxx.

◆ SetNameTitle()

void TNamed::SetNameTitle ( const char * name,
const char * title )
virtualinherited

Set all the TNamed parameters (name and title).

WARNING: if the name is changed and the object is a member of a THashTable or THashList container the container must be Rehash()'ed after SetName(). For example the list of objects in the current directory is a THashList.

Reimplemented in RooAbsArg, RooAbsData, RooDataHist, RooDataSet, RooFitResult, RooPlot, TContextMenu, TGraph2D, TGraph, TH1, and TNode.

Definition at line 163 of file TNamed.cxx.

◆ SetNuisanceParameters()

virtual void RooStats::MCMCCalculator::SetNuisanceParameters ( const RooArgSet & set)
inlinevirtual

specify the nuisance parameters (eg. the rest of the parameters)

Definition at line 71 of file MCMCCalculator.h.

◆ SetNumBins()

virtual void RooStats::MCMCCalculator::SetNumBins ( Int_t numBins)
inlinevirtual

set the number of bins to create for each axis when constructing the interval

Definition at line 101 of file MCMCCalculator.h.

◆ SetNumBurnInSteps()

virtual void RooStats::MCMCCalculator::SetNumBurnInSteps ( Int_t numBurnInSteps)
inlinevirtual

set the number of steps in the chain to discard as burn-in, starting from the first

Definition at line 97 of file MCMCCalculator.h.

◆ SetNumIters()

virtual void RooStats::MCMCCalculator::SetNumIters ( Int_t numIters)
inlinevirtual

set the number of iterations to run the metropolis algorithm

Definition at line 92 of file MCMCCalculator.h.

◆ SetObjectStat()

void TObject::SetObjectStat ( Bool_t stat)
staticinherited

Turn on/off tracking of objects in the TObjectTable.

Definition at line 1188 of file TObject.cxx.

◆ SetParameters()

virtual void RooStats::MCMCCalculator::SetParameters ( const RooArgSet & set)
inlinevirtual

specify the parameters of interest in the interval

Definition at line 64 of file MCMCCalculator.h.

◆ SetPdf()

virtual void RooStats::MCMCCalculator::SetPdf ( RooAbsPdf & pdf)
inlinevirtual

Set the Pdf if not already there.

Definition at line 58 of file MCMCCalculator.h.

◆ SetPriorPdf()

virtual void RooStats::MCMCCalculator::SetPriorPdf ( RooAbsPdf & pdf)
inlinevirtual

Set the Prior Pdf if not already there.

Definition at line 61 of file MCMCCalculator.h.

◆ SetProposalFunction()

virtual void RooStats::MCMCCalculator::SetProposalFunction ( ProposalFunction & proposalFunction)
inlinevirtual

set the proposal function for suggesting new points for the MCMC

Definition at line 88 of file MCMCCalculator.h.

◆ SetTestSize()

void RooStats::MCMCCalculator::SetTestSize ( double size)
inlineoverridevirtual

set the size of the test (rate of Type I error) ( Eg. 0.05 for a 95% Confidence Interval)

Implements RooStats::IntervalCalculator.

Definition at line 82 of file MCMCCalculator.h.

◆ SetTitle()

void TNamed::SetTitle ( const char * title = "")
virtualinherited

◆ SetUniqueID()

void TObject::SetUniqueID ( UInt_t uid)
virtualinherited

Set the unique object id.

Definition at line 899 of file TObject.cxx.

◆ SetupBasicUsage()

void MCMCCalculator::SetupBasicUsage ( )
protected

Constructor for automatic configuration with basic settings.

Uses a UniformProposal, 10,000 iterations, 40 burn in steps, 50 bins for each RooRealVar, determines interval by histogram. Finds a 95% confidence interval.

Definition at line 105 of file MCMCCalculator.cxx.

◆ SetUseKeys()

virtual void RooStats::MCMCCalculator::SetUseKeys ( bool useKeys)
inlinevirtual

set whether to use kernel estimation to determine the interval

Definition at line 106 of file MCMCCalculator.h.

◆ SetUseSparseHist()

virtual void RooStats::MCMCCalculator::SetUseSparseHist ( bool useSparseHist)
inlinevirtual

set whether to use sparse histogram (if using histogram at all)

Definition at line 108 of file MCMCCalculator.h.

◆ Size()

double RooStats::MCMCCalculator::Size ( ) const
inlineoverridevirtual

Get the size of the test (eg. rate of Type I error).

Implements RooStats::IntervalCalculator.

Definition at line 48 of file MCMCCalculator.h.

◆ Sizeof()

Int_t TNamed::Sizeof ( ) const
virtualinherited

Return size of the TNamed part of the TObject.

Reimplemented in TDirectory, TDirectoryFile, TFile, TKey, TSQLFile, and TXMLFile.

Definition at line 182 of file TNamed.cxx.

◆ Streamer()

void RooStats::MCMCCalculator::Streamer ( TBuffer & )
overridevirtual

Reimplemented from RooStats::IntervalCalculator.

◆ StreamerNVirtual()

void RooStats::MCMCCalculator::StreamerNVirtual ( TBuffer & ClassDef_StreamerNVirtual_b)
inline

Definition at line 204 of file MCMCCalculator.h.

◆ SysError()

void TObject::SysError ( const char * location,
const char * fmt,
... ) const
virtualinherited

Issue system error message.

Use "location" to specify the method where the system error occurred. Accepts standard printf formatting arguments.

Definition at line 1112 of file TObject.cxx.

◆ TestBit()

Bool_t TObject::TestBit ( UInt_t f) const
inlineinherited

Definition at line 204 of file TObject.h.

◆ TestBits()

Int_t TObject::TestBits ( UInt_t f) const
inlineinherited

Definition at line 205 of file TObject.h.

◆ UseCurrentStyle()

void TObject::UseCurrentStyle ( )
virtualinherited

Set current style settings in this object This function is called when either TCanvas::UseCurrentStyle or TROOT::ForceStyle have been invoked.

Reimplemented in TAxis3D, TCanvas, TFrame, TGraph, TH1, TPad, TPaveStats, TPaveText, and TTree.

Definition at line 909 of file TObject.cxx.

◆ Warning()

void TObject::Warning ( const char * location,
const char * fmt,
... ) const
virtualinherited

Issue warning message.

Use "location" to specify the method where the warning occurred. Accepts standard printf formatting arguments.

Definition at line 1084 of file TObject.cxx.

◆ Write() [1/2]

Int_t TObject::Write ( const char * name = nullptr,
Int_t option = 0,
Int_t bufsize = 0 )
virtualinherited

Write this object to the current directory.

For more see the const version of this method.

Reimplemented in ROOT::TBufferMergerFile, TBuffer, TCollection, TDirectory, TDirectoryFile, TFile, TMap, TParallelMergingFile, TSQLFile, TTree, and TXMLFile.

Definition at line 989 of file TObject.cxx.

◆ Write() [2/2]

Int_t TObject::Write ( const char * name = nullptr,
Int_t option = 0,
Int_t bufsize = 0 ) const
virtualinherited

Write this object to the current directory.

The data structure corresponding to this object is serialized. The corresponding buffer is written to the current directory with an associated key with name "name".

Writing an object to a file involves the following steps:

  • Creation of a support TKey object in the current directory. The TKey object creates a TBuffer object.
  • The TBuffer object is filled via the class::Streamer function.
  • If the file is compressed (default) a second buffer is created to hold the compressed buffer.
  • Reservation of the corresponding space in the file by looking in the TFree list of free blocks of the file.
  • The buffer is written to the file.

Bufsize can be given to force a given buffer size to write this object. By default, the buffersize will be taken from the average buffer size of all objects written to the current file so far.

If a name is specified, it will be the name of the key. If name is not given, the name of the key will be the name as returned by GetName().

The option can be a combination of: kSingleKey, kOverwrite or kWriteDelete Using the kOverwrite option a previous key with the same name is overwritten. The previous key is deleted before writing the new object. Using the kWriteDelete option a previous key with the same name is deleted only after the new object has been written. This option is safer than kOverwrite but it is slower. NOTE: Neither kOverwrite nor kWriteDelete reduces the size of a TFile– the space is simply freed up to be overwritten; in the case of a TTree, it is more complicated. If one opens a TTree, appends some entries, then writes it out, the behaviour is effectively the same. If, however, one creates a new TTree and writes it out in this way, only the metadata is replaced, effectively making the old data invisible without deleting it. TTree::Delete() can be used to mark all disk space occupied by a TTree as free before overwriting its metadata this way. The kSingleKey option is only used by TCollection::Write() to write a container with a single key instead of each object in the container with its own key.

An object is read from the file into memory via TKey::Read() or via TObject::Read().

The function returns the total number of bytes written to the file. It returns 0 if the object cannot be written.

Reimplemented in TBuffer, TCollection, TDirectory, TDirectoryFile, TFile, TMap, TParallelMergingFile, TSQLFile, TTree, and TXMLFile.

Definition at line 964 of file TObject.cxx.

Member Data Documentation

◆ fAxes

RooArgList* RooStats::MCMCCalculator::fAxes
protected

which variables to put on each axis

Definition at line 180 of file MCMCCalculator.h.

◆ fBits

UInt_t TObject::fBits
privateinherited

bit field status word

Definition at line 47 of file TObject.h.

◆ fChainParams

RooArgSet RooStats::MCMCCalculator::fChainParams
protected

parameters to store in the chain (if not specified they are all of them )

Definition at line 169 of file MCMCCalculator.h.

◆ fConditionalObs

RooArgSet RooStats::MCMCCalculator::fConditionalObs
protected

conditional observables

Definition at line 170 of file MCMCCalculator.h.

◆ fData

RooAbsData* RooStats::MCMCCalculator::fData
protected

pointer to the data (owned by the workspace)

Definition at line 175 of file MCMCCalculator.h.

◆ fDelta

double RooStats::MCMCCalculator::fDelta = -1
protected

acceptable error for Keys cutoffs being equal topCutoff (a) considered == bottomCutoff (b) iff (std::abs(a - b) < std::abs(fDelta * (a + b)/2)); Theoretically, the Abs is not needed here, but floating-point arithmetic does not always work perfectly, and the Abs doesn't hurt

Definition at line 186 of file MCMCCalculator.h.

◆ fEpsilon

double RooStats::MCMCCalculator::fEpsilon = -1
protected

acceptable error for Keys interval determination

Definition at line 184 of file MCMCCalculator.h.

◆ fgDtorOnly

Longptr_t TObject::fgDtorOnly = 0
staticprivateinherited

object for which to call dtor only (i.e. no delete)

Definition at line 49 of file TObject.h.

◆ fGlobalObs

RooArgSet RooStats::MCMCCalculator::fGlobalObs
protected

global observables

Definition at line 171 of file MCMCCalculator.h.

◆ fgObjectStat

Bool_t TObject::fgObjectStat = kTRUE
staticprivateinherited

if true keep track of objects in TObjectTable

Definition at line 50 of file TObject.h.

◆ fIntervalType

enum MCMCInterval::IntervalType RooStats::MCMCCalculator::fIntervalType = MCMCInterval::kShortest
protected

Definition at line 192 of file MCMCCalculator.h.

◆ fLeftSideTF

double RooStats::MCMCCalculator::fLeftSideTF = -1
protected

left side tail-fraction for interval

Definition at line 183 of file MCMCCalculator.h.

◆ fName

TString TNamed::fName
protectedinherited

Definition at line 32 of file TNamed.h.

◆ fNuisParams

RooArgSet RooStats::MCMCCalculator::fNuisParams
protected

nuisance parameters for interval (not really used)

Definition at line 168 of file MCMCCalculator.h.

◆ fNumBins

Int_t RooStats::MCMCCalculator::fNumBins = 0
protected

set the number of bins to create for each axis when constructing the interval

Definition at line 178 of file MCMCCalculator.h.

◆ fNumBurnInSteps

Int_t RooStats::MCMCCalculator::fNumBurnInSteps = 0
protected

number of iterations to discard as burn-in, starting from the first

Definition at line 177 of file MCMCCalculator.h.

◆ fNumIters

Int_t RooStats::MCMCCalculator::fNumIters = 0
protected

number of iterations to run metropolis algorithm

Definition at line 176 of file MCMCCalculator.h.

◆ fPdf

RooAbsPdf* RooStats::MCMCCalculator::fPdf
protected

pointer to common PDF (owned by the workspace)

Definition at line 173 of file MCMCCalculator.h.

◆ fPOI

RooArgSet RooStats::MCMCCalculator::fPOI
protected

parameters of interest for interval

Definition at line 167 of file MCMCCalculator.h.

◆ fPriorPdf

RooAbsPdf* RooStats::MCMCCalculator::fPriorPdf
protected

pointer to prior PDF (owned by the workspace)

Definition at line 174 of file MCMCCalculator.h.

◆ fPropFunc

ProposalFunction* RooStats::MCMCCalculator::fPropFunc
mutableprotected

Proposal function for MCMC integration.

Definition at line 172 of file MCMCCalculator.h.

◆ fSize

double RooStats::MCMCCalculator::fSize = -1
protected

size of the test (eg. specified rate of Type I error)

Definition at line 166 of file MCMCCalculator.h.

◆ fTitle

TString TNamed::fTitle
protectedinherited

Definition at line 33 of file TNamed.h.

◆ fUniqueID

UInt_t TObject::fUniqueID
privateinherited

object unique identifier

Definition at line 46 of file TObject.h.

◆ fUseKeys

bool RooStats::MCMCCalculator::fUseKeys = false
protected

whether to use kernel estimation to determine interval

Definition at line 181 of file MCMCCalculator.h.

◆ fUseSparseHist

bool RooStats::MCMCCalculator::fUseSparseHist = false
protected

whether to use sparse histogram (if using hist at all)

Definition at line 182 of file MCMCCalculator.h.


The documentation for this class was generated from the following files: