Kernel Density Estimation class.
The three main references are:
- "Scott DW, Multivariate Density Estimation. Theory, Practice and Visualization. New York: Wiley",
- "Jann Ben - ETH Zurich, Switzerland -, Univariate kernel density estimation document for KDENS:
Stata module for univariate kernel density estimation."
- "Hardle W, Muller M, Sperlich S, Werwatz A, Nonparametric and Semiparametric Models. Springer."
- "Cranmer KS, Kernel Estimation in High-Energy
Physics. Computer Physics Communications 136:198-207,2001" - e-Print Archive: hep ex/0011057.
The algorithm is briefly described in (4). A binned version is also implemented to address the performance issue due to its data size dependance.
Definition at line 37 of file TKDE.h.
|
| | TKDE () |
| | default constructor used only by I/O
|
| |
| template<class KernelFunction > |
| | TKDE (const Char_t *, const KernelFunction &kernfunc, UInt_t events, const Double_t *data, const Double_t *dataWeight, Double_t xMin=0.0, Double_t xMax=0.0, const Option_t *option="KernelType:UserDefined;Iteration:Adaptive;Mirror:noMirror;Binning:RelaxedBinning", Double_t rho=1.0) |
| | Constructor for weighted data and a user defined kernel function.
|
| |
| template<class KernelFunction > |
| | TKDE (const Char_t *, const KernelFunction &kernfunc, UInt_t events, const Double_t *data, Double_t xMin=0.0, Double_t xMax=0.0, const Option_t *option="KernelType:UserDefined;Iteration:Adaptive;Mirror:noMirror;Binning:RelaxedBinning", Double_t rho=1.0) |
| | Constructor for unweighted data and a user defined kernel function.
|
| |
| | TKDE (UInt_t events, const Double_t *data, const Double_t *dataWeight, Double_t xMin=0.0, Double_t xMax=0.0, const Option_t *option="KernelType:Gaussian;Iteration:Adaptive;Mirror:noMirror;Binning:RelaxedBinning", Double_t rho=1.0) |
| | Constructor for weighted data.
|
| |
| | TKDE (UInt_t events, const Double_t *data, Double_t xMin=0.0, Double_t xMax=0.0, const Option_t *option="KernelType:Gaussian;Iteration:Adaptive;Mirror:noMirror;Binning:RelaxedBinning", Double_t rho=1.0) |
| | Constructor for unweighted data Varius option for TKDE can be passed in the option string as below.
|
| |
| | ~TKDE () override |
| |
| void | Draw (const Option_t *option="") override |
| | Draws either the KDE functions or its errors.
|
| |
| void | Fill (Double_t data) |
| |
| void | Fill (Double_t data, Double_t weight) |
| |
| const Double_t * | GetAdaptiveWeights () const |
| |
| TF1 * | GetApproximateBias (UInt_t npx=100, Double_t xMin=1.0, Double_t xMax=0.0) |
| |
| Double_t | GetBias (Double_t x) const |
| |
| Double_t | GetError (Double_t x) const |
| |
| Double_t | GetFixedWeight () const |
| |
| TF1 * | GetFunction (UInt_t npx=100, Double_t xMin=1.0, Double_t xMax=0.0) |
| |
| TGraphErrors * | GetGraphWithErrors (UInt_t npx=100, Double_t xMin=1.0, Double_t xMax=0.0) |
| | return a TGraphErrors with the KDE values and errors The return object is managed by the user
|
| |
| TF1 * | GetLowerFunction (Double_t confidenceLevel=0.95, UInt_t npx=100, Double_t xMin=1.0, Double_t xMax=0.0) |
| |
| Double_t | GetMean () const |
| |
| Double_t | GetRAMISE () const |
| |
| Double_t | GetSigma () const |
| |
| TF1 * | GetUpperFunction (Double_t confidenceLevel=0.95, UInt_t npx=100, Double_t xMin=1.0, Double_t xMax=0.0) |
| |
| Double_t | GetValue (Double_t x) const |
| |
| TClass * | IsA () const override |
| |
| Double_t | operator() (const Double_t *x, const Double_t *p=nullptr) const |
| |
| Double_t | operator() (Double_t x) const |
| |
| void | SetBinning (EBinning) |
| |
| void | SetIteration (EIteration iter) |
| |
| void | SetKernelType (EKernelType kern) |
| |
| void | SetMirror (EMirror mir) |
| |
| void | SetNBins (UInt_t nbins) |
| |
| void | SetRange (Double_t xMin, Double_t xMax) |
| | By default computed from the data.
|
| |
| void | SetTuneFactor (Double_t rho) |
| |
| void | SetUseBinsNEvents (UInt_t nEvents) |
| |
| void | Streamer (TBuffer &) override |
| | Stream an object of class TObject.
|
| |
| void | StreamerNVirtual (TBuffer &ClassDef_StreamerNVirtual_b) |
| |
|
Allow to change settings These objects are managed by TKDE and should not be deleted by the user
|
| TF1 * | GetDrawnFunction () |
| |
| TF1 * | GetDrawnUpperFunction () |
| |
| TF1 * | GetDrawnLowerFunction () |
| |
| TGraphErrors * | GetDrawnGraph () |
| |
| | TNamed () |
| |
| | TNamed (const char *name, const char *title) |
| |
| | TNamed (const TNamed &named) |
| | TNamed copy ctor.
|
| |
| | TNamed (const TString &name, const TString &title) |
| |
| virtual | ~TNamed () |
| | TNamed destructor.
|
| |
| void | Clear (Option_t *option="") override |
| | Set name and title to empty strings ("").
|
| |
| TObject * | Clone (const char *newname="") const override |
| | Make a clone of an object using the Streamer facility.
|
| |
| Int_t | Compare (const TObject *obj) const override |
| | Compare two TNamed objects.
|
| |
| void | Copy (TObject &named) const override |
| | Copy this to obj.
|
| |
| virtual void | FillBuffer (char *&buffer) |
| | Encode TNamed into output buffer.
|
| |
| const char * | GetName () const override |
| | Returns name of object.
|
| |
| const char * | GetTitle () const override |
| | Returns title of object.
|
| |
| ULong_t | Hash () const override |
| | Return hash value for this object.
|
| |
| TClass * | IsA () const override |
| |
| Bool_t | IsSortable () const override |
| |
| void | ls (Option_t *option="") const override |
| | List TNamed name and title.
|
| |
| TNamed & | operator= (const TNamed &rhs) |
| | TNamed assignment operator.
|
| |
| void | Print (Option_t *option="") const override |
| | Print TNamed name and title.
|
| |
| virtual void | SetName (const char *name) |
| | Set the name of the TNamed.
|
| |
| virtual void | SetNameTitle (const char *name, const char *title) |
| | Set all the TNamed parameters (name and title).
|
| |
| virtual void | SetTitle (const char *title="") |
| | Set the title of the TNamed.
|
| |
| virtual Int_t | Sizeof () const |
| | Return size of the TNamed part of the TObject.
|
| |
| void | Streamer (TBuffer &) override |
| | Stream an object of class TObject.
|
| |
| void | StreamerNVirtual (TBuffer &ClassDef_StreamerNVirtual_b) |
| |
| | TObject () |
| | TObject constructor.
|
| |
| | TObject (const TObject &object) |
| | TObject copy ctor.
|
| |
| virtual | ~TObject () |
| | TObject destructor.
|
| |
| void | AbstractMethod (const char *method) const |
| | Use this method to implement an "abstract" method that you don't want to leave purely abstract.
|
| |
| virtual void | AppendPad (Option_t *option="") |
| | Append graphics object to current pad.
|
| |
| virtual void | Browse (TBrowser *b) |
| | Browse object. May be overridden for another default action.
|
| |
| ULong_t | CheckedHash () |
| | Check and record whether this class has a consistent Hash/RecursiveRemove setup (*) and then return the regular Hash value for this object.
|
| |
| virtual const char * | ClassName () const |
| | Returns name of class to which the object belongs.
|
| |
| virtual void | Delete (Option_t *option="") |
| | Delete this object.
|
| |
| virtual Int_t | DistancetoPrimitive (Int_t px, Int_t py) |
| | Computes distance from point (px,py) to the object.
|
| |
| virtual void | Draw (Option_t *option="") |
| | Default Draw method for all objects.
|
| |
| virtual void | DrawClass () const |
| | Draw class inheritance tree of the class to which this object belongs.
|
| |
| virtual TObject * | DrawClone (Option_t *option="") const |
| | Draw a clone of this object in the current selected pad with: gROOT->SetSelectedPad(c1).
|
| |
| virtual void | Dump () const |
| | Dump contents of object on stdout.
|
| |
| virtual void | Error (const char *method, const char *msgfmt,...) const |
| | Issue error message.
|
| |
| virtual void | Execute (const char *method, const char *params, Int_t *error=nullptr) |
| | Execute method on this object with the given parameter string, e.g.
|
| |
| virtual void | Execute (TMethod *method, TObjArray *params, Int_t *error=nullptr) |
| | Execute method on this object with parameters stored in the TObjArray.
|
| |
| virtual void | ExecuteEvent (Int_t event, Int_t px, Int_t py) |
| | Execute action corresponding to an event at (px,py).
|
| |
| virtual void | Fatal (const char *method, const char *msgfmt,...) const |
| | Issue fatal error message.
|
| |
| virtual TObject * | FindObject (const char *name) const |
| | Must be redefined in derived classes.
|
| |
| virtual TObject * | FindObject (const TObject *obj) const |
| | Must be redefined in derived classes.
|
| |
| virtual Option_t * | GetDrawOption () const |
| | Get option used by the graphics system to draw this object.
|
| |
| virtual const char * | GetIconName () const |
| | Returns mime type name of object.
|
| |
| virtual char * | GetObjectInfo (Int_t px, Int_t py) const |
| | Returns string containing info about the object at position (px,py).
|
| |
| virtual Option_t * | GetOption () const |
| |
| virtual UInt_t | GetUniqueID () const |
| | Return the unique object id.
|
| |
| virtual Bool_t | HandleTimer (TTimer *timer) |
| | Execute action in response of a timer timing out.
|
| |
| Bool_t | HasInconsistentHash () const |
| | Return true is the type of this object is known to have an inconsistent setup for Hash and RecursiveRemove (i.e.
|
| |
| virtual void | Info (const char *method, const char *msgfmt,...) const |
| | Issue info message.
|
| |
| virtual Bool_t | InheritsFrom (const char *classname) const |
| | Returns kTRUE if object inherits from class "classname".
|
| |
| virtual Bool_t | InheritsFrom (const TClass *cl) const |
| | Returns kTRUE if object inherits from TClass cl.
|
| |
| virtual void | Inspect () const |
| | Dump contents of this object in a graphics canvas.
|
| |
| void | InvertBit (UInt_t f) |
| |
| Bool_t | IsDestructed () const |
| | IsDestructed.
|
| |
| virtual Bool_t | IsEqual (const TObject *obj) const |
| | Default equal comparison (objects are equal if they have the same address in memory).
|
| |
| virtual Bool_t | IsFolder () const |
| | Returns kTRUE in case object contains browsable objects (like containers or lists of other objects).
|
| |
| R__ALWAYS_INLINE Bool_t | IsOnHeap () const |
| |
| R__ALWAYS_INLINE Bool_t | IsZombie () const |
| |
| void | MayNotUse (const char *method) const |
| | Use this method to signal that a method (defined in a base class) may not be called in a derived class (in principle against good design since a child class should not provide less functionality than its parent, however, sometimes it is necessary).
|
| |
| virtual Bool_t | Notify () |
| | This method must be overridden to handle object notification (the base implementation is no-op).
|
| |
| void | Obsolete (const char *method, const char *asOfVers, const char *removedFromVers) const |
| | Use this method to declare a method obsolete.
|
| |
| void | operator delete (void *ptr) |
| | Operator delete.
|
| |
| void | operator delete (void *ptr, void *vp) |
| | Only called by placement new when throwing an exception.
|
| |
| void | operator delete[] (void *ptr) |
| | Operator delete [].
|
| |
| void | operator delete[] (void *ptr, void *vp) |
| | Only called by placement new[] when throwing an exception.
|
| |
| void * | operator new (size_t sz) |
| |
| void * | operator new (size_t sz, void *vp) |
| |
| void * | operator new[] (size_t sz) |
| |
| void * | operator new[] (size_t sz, void *vp) |
| |
| TObject & | operator= (const TObject &rhs) |
| | TObject assignment operator.
|
| |
| virtual void | Paint (Option_t *option="") |
| | This method must be overridden if a class wants to paint itself.
|
| |
| virtual void | Pop () |
| | Pop on object drawn in a pad to the top of the display list.
|
| |
| virtual Int_t | Read (const char *name) |
| | Read contents of object with specified name from the current directory.
|
| |
| virtual void | RecursiveRemove (TObject *obj) |
| | Recursively remove this object from a list.
|
| |
| void | ResetBit (UInt_t f) |
| |
| virtual void | SaveAs (const char *filename="", Option_t *option="") const |
| | Save this object in the file specified by filename.
|
| |
| virtual void | SavePrimitive (std::ostream &out, Option_t *option="") |
| | Save a primitive as a C++ statement(s) on output stream "out".
|
| |
| void | SetBit (UInt_t f) |
| |
| void | SetBit (UInt_t f, Bool_t set) |
| | Set or unset the user status bits as specified in f.
|
| |
| virtual void | SetDrawOption (Option_t *option="") |
| | Set drawing option for object.
|
| |
| virtual void | SetUniqueID (UInt_t uid) |
| | Set the unique object id.
|
| |
| void | StreamerNVirtual (TBuffer &ClassDef_StreamerNVirtual_b) |
| |
| virtual void | SysError (const char *method, const char *msgfmt,...) const |
| | Issue system error message.
|
| |
| R__ALWAYS_INLINE Bool_t | TestBit (UInt_t f) const |
| |
| Int_t | TestBits (UInt_t f) const |
| |
| virtual void | UseCurrentStyle () |
| | Set current style settings in this object This function is called when either TCanvas::UseCurrentStyle or TROOT::ForceStyle have been invoked.
|
| |
| virtual void | Warning (const char *method, const char *msgfmt,...) const |
| | Issue warning message.
|
| |
| virtual Int_t | Write (const char *name=nullptr, Int_t option=0, Int_t bufsize=0) |
| | Write this object to the current directory.
|
| |
| virtual Int_t | Write (const char *name=nullptr, Int_t option=0, Int_t bufsize=0) const |
| | Write this object to the current directory.
|
| |
Public Types inherited from TObject
