ConvLayer.h

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// @(#)root/tmva/tmva/dnn:$Id$
// Author: Vladimir Ilievski
 
/**********************************************************************************
 * Project: TMVA - a Root-integrated toolkit for multivariate data analysis       *
 * Package: TMVA                                                                  *
 * Class  : TConvLayer                                                            *
 * Web    : http://tmva.sourceforge.net                                           *
 *                                                                                *
 * Description:                                                                   *
 *      Convolutional Deep Neural Network Layer                                   *
 *                                                                                *
 * Authors (alphabetical):                                                        *
 *      Vladimir Ilievski      <ilievski.vladimir@live.com>  - CERN, Switzerland  *
 *                                                                                *
 * Copyright (c) 2005-2015:                                                       *
 *      CERN, Switzerland                                                         *
 *      U. of Victoria, Canada                                                    *
 *      MPI-K Heidelberg, Germany                                                 *
 *      U. of Bonn, Germany                                                       *
 *                                                                                *
 * Redistribution and use in source and binary forms, with or without             *
 * modification, are permitted according to the terms listed in LICENSE           *
 * (http://tmva.sourceforge.net/LICENSE)                                          *
 **********************************************************************************/
 
#ifndef TMVA_CNN_CONVLAYER
#define TMVA_CNN_CONVLAYER
 
#include "TMatrix.h"
 
#include "TMVA/DNN/GeneralLayer.h"
#include "TMVA/DNN/Functions.h"
#include "TMVA/DNN/CNN/ContextHandles.h"
 
#include <vector>
#include <iostream>
#include <string>
 
namespace TMVA {
namespace DNN {
namespace CNN {
 
typedef struct TConvParams {
 
public:
   size_t batchSize; ///< Batch size used for training and evaluation
 
   size_t inputDepth;  ///< The depth of the previous layer or input.
   size_t inputHeight; ///< The height of the previous layer or input.
   size_t inputWidth;  ///< The width of the previous layer or input.
 
   size_t numberFilters; ///< The number of the filters, which is equal to the output's depth.
   size_t filterHeight;  ///< The height of the filter.
   size_t filterWidth;   ///< The width of the filter.
 
   size_t strideRows;    ///< The number of row pixels to slid the filter each step.
   size_t strideCols;    ///< The number of column pixels to slid the filter each step.
   size_t paddingHeight; ///< The number of zero layers added top and bottom of the input.
   size_t paddingWidth;  ///< The number of zero layers left and right of the input.
 
   TConvParams(size_t _batchSize, size_t _inputDepth, size_t _inputHeight, size_t _inputWidth, size_t _numberFilters,
               size_t _filterHeight, size_t _filterWidth, size_t _strideRows, size_t _strideCols,
               size_t _paddingHeight, size_t _paddingWidth)
           : batchSize(_batchSize), inputDepth(_inputDepth), inputHeight(_inputHeight), inputWidth(_inputWidth),
             numberFilters(_numberFilters), filterHeight(_filterHeight), filterWidth(_filterWidth),
             strideRows(_strideRows), strideCols(_strideCols), paddingHeight(_paddingHeight),
             paddingWidth(_paddingWidth)
   {}
} TConvParams;
 
 
 
template <typename Architecture_t>
class TConvLayer : public VGeneralLayer<Architecture_t> {
public:
   using Tensor_t = typename Architecture_t::Tensor_t;
   using Matrix_t = typename Architecture_t::Matrix_t;
   using Scalar_t = typename Architecture_t::Scalar_t;
 
   using LayerDescriptor_t   = typename Architecture_t::ConvolutionDescriptor_t;
   using WeightsDescriptor_t = typename Architecture_t::FilterDescriptor_t;
   using HelperDescriptor_t  = typename Architecture_t::ActivationDescriptor_t;
 
   using AlgorithmForward_t  = typename Architecture_t::AlgorithmForward_t;  // Forward layer operation
   using AlgorithmBackward_t = typename Architecture_t::AlgorithmBackward_t; // Backward layer operation
   using AlgorithmHelper_t   = typename Architecture_t::AlgorithmHelper_t;   // Used for weight grad backward pass
   using ReduceTensorDescriptor_t = typename Architecture_t::ReduceTensorDescriptor_t; // used for reduction of tensor(bias grad)
 
   // FIXME: Add other cudnn types (algorithm preference etc.)
   using AlgorithmDataType_t = typename Architecture_t::AlgorithmDataType_t;
 
   /* Calculate the output dimension of the convolutional layer */
   static size_t calculateDimension(size_t imgDim, size_t fltDim, size_t padding, size_t stride);
 
   /* Calculate the number of pixels in a single receptive field */
   static size_t inline calculateNLocalViewPixels(size_t depth, size_t height, size_t width) { return depth * height * width; }
 
   /* Calculate the number of receptive fields in an image given the filter and image sizes */
   static size_t calculateNLocalViews(size_t inputHeight, size_t filterHeight, size_t paddingHeight, size_t strideRows,
                               size_t inputWidth, size_t filterWidth, size_t paddingWidth, size_t strideCols);
 
protected:
   size_t fFilterDepth;  ///< The depth of the filter.
   size_t fFilterHeight; ///< The height of the filter.
   size_t fFilterWidth;  ///< The width of the filter.
 
   size_t fStrideRows;   ///< The number of row pixels to slid the filter each step.
   size_t fStrideCols;   ///< The number of column pixels to slid the filter each step.
 
   size_t fNLocalViewPixels;     ///< The number of pixels in one local image view.
   size_t fNLocalViews;          ///< The number of local views in one image.
 
   Scalar_t fDropoutProbability; ///< Probability that an input is active.
 
   TDescriptors * fDescriptors = nullptr;  ///< Keeps the convolution, activations and filter descriptors
 
   TWorkspace * fWorkspace = nullptr;
private:
   size_t fPaddingHeight;        ///< The number of zero layers added top and bottom of the input.
   size_t fPaddingWidth;         ///< The number of zero layers left and right of the input.
 
   Tensor_t fInputActivation;        ///< First output of this layer after conv, before activation.
 
   std::vector<int> fBackwardIndices;  ///< Vector of indices used for a fast Im2Col in backward pass
 
   EActivationFunction fF;             ///< Activation function of the layer.
   ERegularization fReg;               ///< The regularization method.
   Scalar_t fWeightDecay;              ///< The weight decay.
 
   Tensor_t fForwardTensor;            ///< Cache tensor used for speeding-up the forward pass.
 
   void InitializeDescriptors();
   void ReleaseDescriptors();
   void InitializeWorkspace();
   void FreeWorkspace();
 
public:
   /*! Constructor. */
   TConvLayer(size_t BatchSize, size_t InputDepth, size_t InputHeight, size_t InputWidth, size_t Depth, EInitialization Init,
              size_t FilterHeight, size_t FilterWidth, size_t StrideRows, size_t StrideCols, size_t PaddingHeight,
              size_t PaddingWidth, Scalar_t DropoutProbability, EActivationFunction f, ERegularization Reg,
              Scalar_t WeightDecay);
 
   /*! Copy the conv layer provided as a pointer */
   TConvLayer(TConvLayer<Architecture_t> *layer);
 
   /*! Copy constructor. */
   TConvLayer(const TConvLayer &);
 
   /*! Destructor. */
   virtual ~TConvLayer();
 
   //virtual void Initialize();
 
   /*! Computes activation of the layer for the given input. The input
   * must be in 3D tensor form with the different matrices corresponding to
   * different events in the batch. Computes activations as well as
   * the first partial derivative of the activation function at those
   * activations. */
   void Forward(Tensor_t &input, bool applyDropout = false);
 
   /*! Compute weight, bias and activation gradients. Uses the precomputed
    *  first partial derivatives of the activation function computed during
    *  forward propagation and modifies them. Must only be called directly
    *  at the corresponding call to Forward(...). */
   void Backward(Tensor_t &gradients_backward, const Tensor_t &activations_backward);
   ////              Tensor_t &inp1, Tensor_t &inp2);
 
   /*! Prints the info about the layer. */
   void Print() const;
 
   /*! Writes the information and the weights about the layer in an XML node. */
   virtual void AddWeightsXMLTo(void *parent);
 
   /*! Read the information and the weights about the layer from XML node. */
   virtual void ReadWeightsFromXML(void *parent);
 
   /*! Getters */
   size_t GetFilterDepth() const { return fFilterDepth; }
   size_t GetFilterHeight() const { return fFilterHeight; }
   size_t GetFilterWidth() const { return fFilterWidth; }
 
   size_t GetStrideRows() const { return fStrideRows; }
   size_t GetStrideCols() const { return fStrideCols; }
 
   size_t GetPaddingHeight() const { return fPaddingHeight; }
   size_t GetPaddingWidth() const { return fPaddingWidth; }
 
   size_t GetNLocalViewPixels() const { return fNLocalViewPixels; }
   size_t GetNLocalViews() const { return fNLocalViews; }
 
   Scalar_t GetDropoutProbability() const { return fDropoutProbability; }
 
   const Tensor_t &GetInputActivation() const { return fInputActivation; }
   Tensor_t &GetInputActivation() { return fInputActivation; }
 
   Matrix_t &GetInputActivationAt(size_t i) { return fInputActivation[i]; }
   const Matrix_t &GetInputActivationAt(size_t i) const { return fInputActivation[i]; }
 
   const Tensor_t &GetForwardMatrices() const { return fForwardTensor; }
   Tensor_t &GetForwardMatrices() { return fForwardTensor; }
 
   EActivationFunction GetActivationFunction() const { return fF; }
   ERegularization GetRegularization() const { return fReg; }
   Scalar_t GetWeightDecay() const { return fWeightDecay; }
 
   // The following getters are used for testing
   TDescriptors * GetDescriptors() {return fDescriptors;}
   const TDescriptors * GetDescriptors() const {return fDescriptors;}
 
   TWorkspace * GetWorkspace() {return fWorkspace;}
   const TWorkspace * GetWorkspace() const {return fWorkspace;}
};
 
 
//
//
//  Conv Layer Class - Implementation
//______________________________________________________________________________
template <typename Architecture_t>
TConvLayer<Architecture_t>::TConvLayer(size_t batchSize, size_t inputDepth, size_t inputHeight, size_t inputWidth,
                                       size_t depth, EInitialization init, size_t filterHeight, size_t filterWidth,
                                       size_t strideRows, size_t strideCols, size_t paddingHeight, size_t paddingWidth,
                                       Scalar_t dropoutProbability, EActivationFunction f, ERegularization reg,
                                       Scalar_t weightDecay)
   : VGeneralLayer<Architecture_t>(batchSize, inputDepth, inputHeight, inputWidth, depth,
                                   calculateDimension(inputHeight, filterHeight, paddingHeight, strideRows),
                                   calculateDimension(inputWidth, filterWidth, paddingWidth, strideCols),
                                   1, depth, calculateNLocalViewPixels(inputDepth, filterHeight, filterWidth),
                                   1, depth, 1, batchSize, depth,
                                   calculateNLocalViews(inputHeight, filterHeight, paddingHeight, strideRows,
                                                        inputWidth, filterWidth, paddingWidth, strideCols),
                                   init),
     fFilterDepth(inputDepth), fFilterHeight(filterHeight), fFilterWidth(filterWidth), fStrideRows(strideRows),
     fStrideCols(strideCols), fNLocalViewPixels(calculateNLocalViewPixels(inputDepth, filterHeight, filterWidth)),
     fNLocalViews(calculateNLocalViews(inputHeight, filterHeight, paddingHeight, strideRows,
                                       inputWidth, filterWidth, paddingWidth, strideCols)),
     fDropoutProbability(dropoutProbability), fPaddingHeight(paddingHeight), fPaddingWidth(paddingWidth),
     fInputActivation(), fF(f), fReg(reg), fWeightDecay(weightDecay)
{
   /** Each element in the vector is a `T_Matrix` representing an event, therefore `vec.size() == batchSize`.
    *  Cells in these matrices are distributed in the following manner:
    *  Each row represents a single feature map, therefore we have `nRows == depth`.
    *  Each column represents a single pixel in that feature map, therefore we have `nCols == nLocalViews`.
    **/
   fInputActivation = Tensor_t( batchSize, depth, fNLocalViews);     // create tensor (shape is B x C x LV)
   fForwardTensor = Tensor_t ( batchSize, fNLocalViews, fNLocalViewPixels );
 
 
   InitializeDescriptors();
   InitializeWorkspace();
}
 
//______________________________________________________________________________
template <typename Architecture_t>
TConvLayer<Architecture_t>::TConvLayer(TConvLayer<Architecture_t> *layer)
   : VGeneralLayer<Architecture_t>(layer), fFilterDepth(layer->GetFilterDepth()),
     fFilterHeight(layer->GetFilterHeight()), fFilterWidth(layer->GetFilterWidth()),
     fStrideRows(layer->GetStrideRows()), fStrideCols(layer->GetStrideCols()),
     fNLocalViewPixels(layer->GetNLocalViewPixels()), fNLocalViews(layer->GetNLocalViews()),
     fDropoutProbability(layer->GetDropoutProbability()), fPaddingHeight(layer->GetPaddingHeight()),
     fPaddingWidth(layer->GetPaddingWidth()),
     fInputActivation( layer->GetInputActivation().GetShape() ),
     fF(layer->GetActivationFunction()),
     fReg(layer->GetRegularization()), fWeightDecay(layer->GetWeightDecay()),
     fForwardTensor( layer->GetForwardMatrices().GetShape() )
{
   InitializeDescriptors();
   InitializeWorkspace();
 
}
 
//______________________________________________________________________________
template <typename Architecture_t>
TConvLayer<Architecture_t>::TConvLayer(const TConvLayer &convLayer)
   :  VGeneralLayer<Architecture_t>(convLayer), fFilterDepth(convLayer.fFilterDepth),
      fFilterHeight(convLayer.fFilterHeight), fFilterWidth(convLayer.fFilterWidth), fStrideRows(convLayer.fStrideRows),
      fStrideCols(convLayer.fStrideCols), fNLocalViewPixels(convLayer.fNLocalViewPixels),
      fNLocalViews(convLayer.fNLocalViews), fDropoutProbability(convLayer.fDropoutProbability),
      fPaddingHeight(convLayer.fPaddingHeight), fPaddingWidth(convLayer.fPaddingWidth),
      fInputActivation( convLayer.GetInputActivation().GetShape() ),
      fF(convLayer.fF),
      fReg(convLayer.fReg), fWeightDecay(convLayer.fWeightDecay),
      fForwardTensor( convLayer.GetForwardMatrices().GetShape() )
{
   InitializeDescriptors();
   InitializeWorkspace();
}
 
//______________________________________________________________________________
//FIXME: Add function for cudaFree
template <typename Architecture_t>
TConvLayer<Architecture_t>::~TConvLayer()
{
   //std::cout << "!!!!Delete conv layer " << this->GetOutput().GetShape()[1] << "  " << this->GetOutput().GetShape()[2] << "  " << this->GetOutput().GetShape()[3] << std::endl;
   if (fDescriptors) {
      ReleaseDescriptors();
      delete fDescriptors;
   }
 
   if (fWorkspace) {
      FreeWorkspace();
      delete fWorkspace;
   }
}
 
 
//______________________________________________________________________________
template <typename Architecture_t>
auto TConvLayer<Architecture_t>::Forward(Tensor_t &input, bool /*applyDropout*/) -> void
{
   TConvParams params(this->GetBatchSize(), this->GetInputDepth(), this->GetInputHeight(), this->GetInputWidth(),
                      this->GetDepth(), this->GetFilterHeight(), this->GetFilterWidth(),
                      this->GetStrideRows(), this->GetStrideCols(), this->GetPaddingHeight(), this->GetPaddingWidth());
 
   //R__ASSERT( input.size() > 0);
   Architecture_t::ConvLayerForward(this->GetOutput(), this->GetInputActivation(), input, this->GetWeightsAt(0),
                                    this->GetBiasesAt(0), params, this->GetActivationFunction(),
                                    this->GetForwardMatrices(), (TCNNDescriptors<TConvLayer<Architecture_t>> &) (*fDescriptors),
                                    (TCNNWorkspace<TConvLayer<Architecture_t>> &) (*fWorkspace));
}
 
//______________________________________________________________________________
template <typename Architecture_t>
auto TConvLayer<Architecture_t>::Backward(Tensor_t &gradients_backward,
                                          const Tensor_t &activations_backward) -> void
//                                          Tensor_t & /*inp1*/, Tensor_t &
//                                          /*inp2*/) -> void
{
   Architecture_t::ConvLayerBackward(
      gradients_backward, this->GetWeightGradientsAt(0), this->GetBiasGradientsAt(0), this->GetInputActivation(),
      this->GetActivationGradients(), this->GetWeightsAt(0), activations_backward, this->GetOutput(),
      this->GetActivationFunction(),
      (TCNNDescriptors<TConvLayer<Architecture_t>> &) (*fDescriptors),
      (TCNNWorkspace<TConvLayer<Architecture_t>> &) (*fWorkspace),
      this->GetBatchSize(), this->GetInputHeight(), this->GetInputWidth(), this->GetDepth(),
      this->GetHeight(), this->GetWidth(), this->GetFilterDepth(), this->GetFilterHeight(),
      this->GetFilterWidth(), this->GetNLocalViews());
 
   addRegularizationGradients<Architecture_t>(this->GetWeightGradientsAt(0), this->GetWeightsAt(0),
                                              this->GetWeightDecay(), this->GetRegularization());
}
 
//______________________________________________________________________________
template <typename Architecture_t>
auto TConvLayer<Architecture_t>::Print() const -> void
{
   std::cout << " CONV LAYER: \t";
   std::cout << "( W = " << this->GetWidth() << " , ";
   std::cout << " H = " << this->GetHeight() << " , ";
   std::cout << " D = " << this->GetDepth() << " ) ";
 
   std::cout << "\t Filter ( W = " << this->GetFilterWidth() << " , ";
   std::cout << " H = " << this->GetFilterHeight() << " ) ";
   //std::cout << "\t Local Views = " << this->GetNLocalViews()  << " " ;
   if (this->GetOutput().GetSize() > 0) {
      std::cout << "\tOutput = ( " << this->GetOutput().GetFirstSize() << " , "
                << this->GetOutput().GetCSize() << " , " << this->GetOutput().GetHSize() << " , " << this->GetOutput().GetWSize()
                << " ) ";
   }
   std::vector<std::string> activationNames = { "Identity","Relu","Sigmoid","Tanh","SymmRelu","SoftSign","Gauss" };
   std::cout << "\t Activation Function = ";
   std::cout << activationNames[ static_cast<int>(fF) ] << std::endl;
}
 
//______________________________________________________________________________
template <typename Architecture_t>
void TConvLayer<Architecture_t>::AddWeightsXMLTo(void *parent)
{
   auto layerxml = gTools().xmlengine().NewChild(parent, nullptr, "ConvLayer");
 
   gTools().xmlengine().NewAttr(layerxml, nullptr, "Depth", gTools().StringFromInt(this->GetDepth()));
   gTools().xmlengine().NewAttr(layerxml, nullptr, "FilterHeight", gTools().StringFromInt(this->GetFilterHeight()));
   gTools().xmlengine().NewAttr(layerxml, nullptr, "FilterWidth", gTools().StringFromInt(this->GetFilterWidth()));
   gTools().xmlengine().NewAttr(layerxml, nullptr, "StrideRows", gTools().StringFromInt(this->GetStrideRows()));
   gTools().xmlengine().NewAttr(layerxml, nullptr, "StrideCols", gTools().StringFromInt(this->GetStrideCols()));
   gTools().xmlengine().NewAttr(layerxml, nullptr, "PaddingHeight", gTools().StringFromInt(this->GetPaddingHeight()));
   gTools().xmlengine().NewAttr(layerxml, nullptr, "PaddingWidth", gTools().StringFromInt(this->GetPaddingWidth()));
 
 
   int activationFunction = static_cast<int>(this -> GetActivationFunction());
   gTools().xmlengine().NewAttr(layerxml, nullptr, "ActivationFunction",
                                TString::Itoa(activationFunction, 10));
 
   // write weights and bias matrix
   this->WriteMatrixToXML(layerxml, "Weights", this -> GetWeightsAt(0));
   this->WriteMatrixToXML(layerxml, "Biases",  this -> GetBiasesAt(0));
}
 
//______________________________________________________________________________
template <typename Architecture_t>
void TConvLayer<Architecture_t>::ReadWeightsFromXML(void *parent)
{
   // read weights and biases
   // the meta information is read before because it is needed before creating the Conv layer
   this->ReadMatrixXML(parent,"Weights", this -> GetWeightsAt(0));
   this->ReadMatrixXML(parent,"Biases", this -> GetBiasesAt(0));
}
 
template <typename Architecture_t>
size_t TConvLayer<Architecture_t>::calculateDimension(size_t imgDim, size_t fltDim, size_t padding, size_t stride)
{
   size_t temp = imgDim - fltDim + 2 * padding;
   if (temp % stride || temp + stride <= 0) {
      Fatal("calculateDimension", "Not compatible hyper parameters for layer - (imageDim, filterDim, padding, stride) "
            "%zu, %zu, %zu, %zu", imgDim, fltDim, padding, stride);
   }
   return temp / stride + 1;
}
 
template <typename Architecture_t>
size_t TConvLayer<Architecture_t>::calculateNLocalViews(size_t inputHeight, size_t filterHeight, size_t paddingHeight,
                                                        size_t strideRows, size_t inputWidth, size_t filterWidth,
                                                        size_t paddingWidth, size_t strideCols)
{
    int height = calculateDimension(inputHeight, filterHeight, paddingHeight, strideRows);
    int width = calculateDimension(inputWidth, filterWidth, paddingWidth, strideCols);
 
    return height * width;
}
 
//______________________________________________________________________________
template <typename Architecture_t>
void TConvLayer<Architecture_t>::InitializeDescriptors() {
   Architecture_t::InitializeConvDescriptors(fDescriptors, this);
}
 
template <typename Architecture_t>
void TConvLayer<Architecture_t>::ReleaseDescriptors() {
   Architecture_t::ReleaseConvDescriptors(fDescriptors);
}
 
//______________________________________________________________________________
template <typename Architecture_t>
void TConvLayer<Architecture_t>::InitializeWorkspace() {
   TConvParams params(this->GetBatchSize(), this->GetInputDepth(), this->GetInputHeight(), this->GetInputWidth(),
                      this->GetDepth(), this->GetFilterHeight(), this->GetFilterWidth(),
                      this->GetStrideRows(), this->GetStrideCols(), this->GetPaddingHeight(), this->GetPaddingWidth());
 
   Architecture_t::InitializeConvWorkspace(fWorkspace, fDescriptors, params, this);
}
 
template <typename Architecture_t>
void TConvLayer<Architecture_t>::FreeWorkspace() {
   Architecture_t::FreeConvWorkspace(fWorkspace);
}
 
//______________________________________________________________________________
 
} // namespace CNN
} // namespace DNN
} // namespace TMVA
 
#endif