Factory classes to create RooFit workspaces from histograms.
This is a package that creates a RooFit probability density function from ROOT histograms of expected distributions and histograms that represent the +/- 1 sigma variations from systematic effects. The resulting probability density function can then be used with any of the statistical tools provided within RooStats, such as the profile likelihood ratio, Feldman-Cousins, etc. In this version, the model is directly fed to a likelihood ratio test, but it needs to be further factorized.
The user needs to provide histograms (in picobarns per bin) and configure the job with XML. The configuration XML is defined in the file $ROOTSYS/config/HistFactorySchema.dtd
, but essentially it is organized as follows (see the examples in ${ROOTSYS}/tutorials/histfactory/
)
For more documentation see CERN-OPEN-2012-016.
For tutorials see HistFactory Tutorials.
Namespaces | |
namespace | RooStats |
Namespace for the RooStats classes. | |
Classes | |
class | RooStats::HistFactory::Asimov |
TODO Here, we are missing some documentation. More... | |
class | RooStats::HistFactory::Channel |
This class encapsulates all information for the statistical interpretation of one experiment. More... | |
class | RooStats::HistFactory::ConfigParser |
TODO Add documentation. More... | |
class | RooStats::HistFactory::Data |
class | RooStats::HistFactory::EstimateSummary |
class | RooStats::HistFactory::FlexibleInterpVar |
class | Helper |
class | RooStats::HistFactory::HistFactoryNavigation |
class | RooStats::HistFactory::HistFactorySimultaneous |
RooSimultaneous facilitates simultaneous fitting of multiple PDFs to subsets of a given dataset. More... | |
class | RooStats::HistFactory::HistoFactor |
Configuration for an *un*constrained, coherent shape variation of affected samples. More... | |
class | RooStats::HistFactory::HistogramUncertaintyBase |
////////////////////////////////////////////////////////////////////////////////////////////Base class to store the up and down variations for histogram uncertainties. More... | |
class | RooStats::HistFactory::HistoSys |
Configuration for a constrained, coherent shape variation of affected samples. More... | |
class | RooStats::HistFactory::HistoToWorkspaceFactory |
class | RooStats::HistFactory::HistoToWorkspaceFactoryFast |
This class provides helper functions for creating likelihood models from histograms. More... | |
class | RooStats::HistFactory::HistRef |
Internal class wrapping an histogram and managing its content. More... | |
class | RooStats::HistFactory::LinInterpVar |
RooAbsReal that does piecewise-linear interpolations. More... | |
class | RooStats::HistFactory::Measurement |
The RooStats::HistFactory::Measurement class can be used to construct a model by combining multiple RooStats::HistFactory::Channel objects. More... | |
class | RooStats::HistFactory::NormFactor |
Configuration for an un- constrained overall systematic to scale sample normalisations. More... | |
class | RooStats::HistFactory::OverallSys |
Configuration for a constrained overall systematic to scale sample normalisations. More... | |
class | ParamHistFunc |
A class which maps the current values of a RooRealVar (or a set of RooRealVars) to one of a number of RooAbsReal (nominally RooRealVar): More... | |
class | PiecewiseInterpolation |
The PiecewiseInterpolation is a class that can morph distributions into each other, which is useful to estimate systematic uncertainties. More... | |
class | RooStats::HistFactory::RooBarlowBeestonLL |
Class RooBarlowBeestonLL implements the profile likelihood estimator for a given likelihood and set of parameters of interest. More... | |
class | RooStats::HistFactory::Sample |
class | RooStats::HistFactory::ShapeFactor |
*Un*constrained bin-by-bin variation of affected histogram. More... | |
class | RooStats::HistFactory::ShapeSys |
Constrained bin-by-bin variation of affected histogram. More... | |
class | RooStats::HistFactory::StatError |
Statistical error of Monte Carlo predictions. More... | |
class | RooStats::HistFactory::StatErrorConfig |
Configuration to automatically assign nuisance parameters for the statistical error of the Monte Carlo simulations. More... | |
Functions | |
std::string | RooStats::HistFactory::channelNameFromPdf (RooAbsPdf *channelPdf) |
void | RooStats::HistFactory::FactorizeHistFactoryPdf (const RooArgSet &, RooAbsPdf &, RooArgList &, RooArgList &) |
void | RooStats::HistFactory::getDataValuesForObservables (std::map< std::string, std::vector< double > > &ChannelBinDataMap, RooAbsData *data, RooAbsPdf *simPdf) |
int | RooStats::HistFactory::getStatUncertaintyConstraintTerm (RooArgList *constraints, RooRealVar *gamma_stat, RooAbsReal *&pois_mean, RooRealVar *&tau) |
bool | RooStats::HistFactory::getStatUncertaintyFromChannel (RooAbsPdf *channel, ParamHistFunc *¶mfunc, RooArgList *gammaList) |
RooAbsPdf * | RooStats::HistFactory::getSumPdfFromChannel (RooAbsPdf *channel) |
int | main (int argc, char **argv) |
main function of the hist2workspace executable. | |
std::string RooStats::HistFactory::channelNameFromPdf | ( | RooAbsPdf * | channelPdf | ) |
Definition at line 28 of file HistFactoryModelUtils.cxx.
void RooStats::HistFactory::FactorizeHistFactoryPdf | ( | const RooArgSet & | observables, |
RooAbsPdf & | pdf, | ||
RooArgList & | obsTerms, | ||
RooArgList & | constraints | ||
) |
Definition at line 79 of file HistFactoryModelUtils.cxx.
void RooStats::HistFactory::getDataValuesForObservables | ( | std::map< std::string, std::vector< double > > & | ChannelBinDataMap, |
RooAbsData * | data, | ||
RooAbsPdf * | simPdf | ||
) |
Definition at line 219 of file HistFactoryModelUtils.cxx.
int RooStats::HistFactory::getStatUncertaintyConstraintTerm | ( | RooArgList * | constraints, |
RooRealVar * | gamma_stat, | ||
RooAbsReal *& | pois_mean, | ||
RooRealVar *& | tau | ||
) |
Definition at line 303 of file HistFactoryModelUtils.cxx.
bool RooStats::HistFactory::getStatUncertaintyFromChannel | ( | RooAbsPdf * | channel, |
ParamHistFunc *& | paramfunc, | ||
RooArgList * | gammaList | ||
) |
Definition at line 183 of file HistFactoryModelUtils.cxx.
Definition at line 34 of file HistFactoryModelUtils.cxx.
main function of the hist2workspace executable.
It creates RooFit models from an xml config and files with histograms. See MakeModelAndMeasurementFast(), for further instructions.
[in] | -h | Help |
[in] | -standard_form | Standard xml model definitions. See MakeModelAndMeasurementFast() |
[in] | -number_counting_form | Deprecated |
[in] | -v | Switch HistFactory message stream to INFO level. |
[in] | -vv | Switch HistFactory message stream to DEBUG level. |
Definition at line 72 of file hist2workspace.cxx.