RCsvDS.hxx

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// Author: Enric Tejedor CERN  10/2017
 
/*************************************************************************
 * Copyright (C) 1995-2022, Rene Brun and Fons Rademakers.               *
 * All rights reserved.                                                  *
 *                                                                       *
 * For the licensing terms see $ROOTSYS/LICENSE.                         *
 * For the list of contributors see $ROOTSYS/README/CREDITS.             *
 *************************************************************************/
 
#ifndef ROOT_RCSVTDS
#define ROOT_RCSVTDS
 
#include "ROOT/RDataFrame.hxx"
#include "ROOT/RDataSource.hxx"
 
#include <cstdint>
#include <deque>
#include <list>
#include <unordered_map>
#include <set>
#include <memory>
#include <vector>
 
#include <TRegexp.h>
 
namespace ROOT {
 
namespace Internal {
class RRawFile;
}
 
namespace RDF {
 
class RCsvDS final : public ROOT::RDF::RDataSource {
 
private:
   // Possible values are D, O, L, T. This is possible only because we treat double, bool, Long64_t and string
   using ColType_t = char;
   static const std::unordered_map<ColType_t, std::string> fgColTypeMap;
 
   // Regular expressions for type inference
   static const TRegexp fgIntRegex, fgDoubleRegex1, fgDoubleRegex2, fgDoubleRegex3, fgTrueRegex, fgFalseRegex;
 
   std::uint64_t fDataPos = 0;
   bool fReadHeaders = false;
   unsigned int fNSlots = 0U;
   std::unique_ptr<ROOT::Internal::RRawFile> fCsvFile;
   const char fDelimiter;
   const Long64_t fLinesChunkSize;
   ULong64_t fEntryRangesRequested = 0ULL;
   ULong64_t fProcessedLines = 0ULL; // marks the progress of the consumption of the csv lines
   std::vector<std::string> fHeaders; // the column names
   std::unordered_map<std::string, ColType_t> fColTypes;
   std::set<std::string> fColContainingEmpty; // store columns which had empty entry
   std::list<ColType_t> fColTypesList; // column types, order is the same as fHeaders, values the same as fColTypes
   std::vector<std::vector<void *>> fColAddresses;         // fColAddresses[column][slot] (same ordering as fHeaders)
   std::vector<Record_t> fRecords;                         // fRecords[entry][column] (same ordering as fHeaders)
   std::vector<std::vector<double>> fDoubleEvtValues;      // one per column per slot
   std::vector<std::vector<Long64_t>> fLong64EvtValues;    // one per column per slot
   std::vector<std::vector<std::string>> fStringEvtValues; // one per column per slot
   // This must be a deque to avoid the specialisation vector<bool>. This would not
   // work given that the pointer to the boolean in that case cannot be taken
   std::vector<std::deque<bool>> fBoolEvtValues; // one per column per slot
 
   void FillHeaders(const std::string &);
   void FillRecord(const std::string &, Record_t &);
   void GenerateHeaders(size_t);
   std::vector<void *> GetColumnReadersImpl(std::string_view, const std::type_info &) final;
   void ValidateColTypes(std::vector<std::string> &) const;
   void InferColTypes(std::vector<std::string> &);
   void InferType(const std::string &, unsigned int);
   std::vector<std::string> ParseColumns(const std::string &);
   size_t ParseValue(const std::string &, std::vector<std::string> &, size_t);
   ColType_t GetType(std::string_view colName) const;
   void FreeRecords();
 
protected:
   std::string AsString() final;
 
public:
   RCsvDS(std::string_view fileName, bool readHeaders = true, char delimiter = ',', Long64_t linesChunkSize = -1LL,
          std::unordered_map<std::string, char> &&colTypes = {});
   void Finalize() final;
   ~RCsvDS();
   const std::vector<std::string> &GetColumnNames() const final;
   std::vector<std::pair<ULong64_t, ULong64_t>> GetEntryRanges() final;
   std::string GetTypeName(std::string_view colName) const final;
   bool HasColumn(std::string_view colName) const final;
   bool SetEntry(unsigned int slot, ULong64_t entry) final;
   void SetNSlots(unsigned int nSlots) final;
   std::string GetLabel() final;
};
 
////////////////////////////////////////////////////////////////////////////////////////////////
/// \brief Factory method to create a CSV RDataFrame.
/// \param[in] fileName Path of the CSV file.
/// \param[in] readHeaders `true` if the CSV file contains headers as first row, `false` otherwise
///                        (default `true`).
/// \param[in] delimiter Delimiter character (default ',').
/// \param[in] linesChunkSize bunch of lines to read, use -1 to read all
/// \param[in] colTypes Allow user to specify custom column types, accepts an unordered map with keys being
///                      column type, values being type alias ('O' for boolean, 'D' for double, 'L' for
///                      Long64_t, 'T' for std::string)
RDataFrame FromCSV(std::string_view fileName, bool readHeaders = true, char delimiter = ',',
                   Long64_t linesChunkSize = -1LL, std::unordered_map<std::string, char> &&colTypes = {});
 
} // ns RDF
 
} // ns ROOT
 
#endif