rf903_numintcache.py File Reference

Namespaces
namespace	rf903_numintcache

Detailed Description

Numeric algorithm tuning: caching of slow numeric integrals and parameterizations of slow numeric integrals

 
import sys
import ROOT
 
 
def getWorkspace(mode):
    # Create, save or load workspace with pdf
    # -----------------------------------------------------------------------------------
    #
    # Mode = 0 : Create workspace for plain running (no integral caching)
    # Mode = 1 : Generate workspace with precalculated integral and store it on file
    # Mode = 2 : Load previously stored workspace from file
 
    w = ROOT.RooWorkspace()
 
    if mode != 2:
        # Create empty workspace workspace
        w = ROOT.RooWorkspace("w", 1)
 
        # Make a difficult to normalize  pdf in 3 dimensions that is
        # integrated numerically.
        w.factory(
            "EXPR::model('1/((x-a)*(x-a)+0.01)+1/((y-a)*(y-a)+0.01)+1/((z-a)*(z-a)+0.01)',x[-1,1],y[-1,1],z[-1,1],a[-5,5])"
        )
 
    if mode == 1:
        # Instruct model to precalculate normalization integral that integrate at least
        # two dimensions numerically. In self specific case the integral value for
        # all values of parameter 'a' are stored in a histogram and available for use
        # in subsequent fitting and plotting operations (interpolation is
        # applied)
 
        # w.pdf("model").setNormValueCaching(3)
        model = w["model"]
        model.setStringAttribute("CACHEPARMINT", "x:y:z")
 
        # Evaluate pdf once to trigger filling of cache
        normSet = {w["x"], w["y"], w["z"]}
        model.getVal(normSet)
        w.writeToFile("rf903_numintcache.root")
 
    if mode == 2:
        # Load preexisting workspace from file in mode==2
        f = ROOT.TFile("rf903_numintcache.root")
        w = f.Get("w")
 
    # Return created or loaded workspace
    return w
 
 
mode = 0
# Mode = 0 : Run plain fit (slow)
# Mode = 1 : Generate workspace with precalculated integral and store it on file (prepare for accelerated running)
# Mode = 2 : Run fit from previously stored workspace including cached
# integrals (fast, run in mode=1 first)
 
# Create, save or load workspace with pdf
# -----------------------------------------------------------------------------------
 
# Make/load workspace, here in mode 1
w = getWorkspace(mode)
if mode == 1:
    # Show workspace that was created
    w.Print()
 
    # Show plot of cached integral values
    hhcache = w.expensiveObjectCache().getObj(1)
    if hhcache:
        ROOT.TCanvas("rf903_numintcache", "rf903_numintcache", 600, 600)
        hhcache.createHistogram("a").Draw()
    else:
        ROOT.RooFit.Error("rf903_numintcache", "Cached histogram is not existing in workspace")
        sys.exit()
 
# Use pdf from workspace for generation and fitting
# -----------------------------------------------------------------------------------
 
# ROOT.This is always slow (need to find maximum function value
# empirically in 3D space)
model = w["model"]
d = model.generate({w["x"], w["y"], w["z"]}, 1000)
 
# ROOT.This is slow in mode 0, fast in mode 1
model.fitTo(d, Verbose=True, Timer=True)
 
# Projection on x (always slow as 2D integral over Y, at fitted value of a
# is not cached)
framex = w["x"].frame(Title="Projection of 3D model on X")
d.plotOn(framex)
model.plotOn(framex)
 
# Draw x projection on canvas
c = ROOT.TCanvas("rf903_numintcache", "rf903_numintcache", 600, 600)
framex.Draw()
 
c.SaveAs("rf903_numintcache.png")
 
# Make workspace available on command line after macro finishes
ROOT.gDirectory.Add(w)

Date

February 2018

Authors

Clemens Lange, Wouter Verkerke (C++ version)

Definition in file rf903_numintcache.py.