A class for performing a hypothesis test inversion by scanning the hypothesis test results of a HypoTestCalculator for various values of the parameter of interest.
By looking at the confidence level curve of the result, an upper limit can be derived by computing the intersection of the confidence level curve with the desired confidence level. The class implements the RooStats::IntervalCalculator interface, and returns a RooStats::HypoTestInverterResult. The result is a SimpleInterval, which via the method UpperLimit() returns to the user the upper limit value.
The HypoTestInverter implements various options for performing the scan.
The class can scan the CLs+b values or alternatively CLs. For the latter, call HypoTestInverter::UseCLs().
Definition at line 36 of file HypoTestInverter.h.
Public Types | |
enum | ECalculatorType { kUndefined = 0 , kHybrid = 1 , kFrequentist = 2 , kAsymptotic = 3 } |
Public Member Functions | |
HypoTestInverter () | |
default constructor (doesn't do anything) More... | |
HypoTestInverter (AsymptoticCalculator &hc, RooRealVar *scannedVariable, double size=0.05) | |
Constructor from a reference to a AsymptoticCalculator The calculator must be created before by using the S+B model for the null and the B model for the alt If no variable to scan are given they are assumed to be the first variable from the parameter of interests of the null model. More... | |
HypoTestInverter (FrequentistCalculator &hc, RooRealVar *scannedVariable, double size=0.05) | |
Constructor from a reference to a FrequentistCalculator The calculator must be created before by using the S+B model for the null and the B model for the alt If no variable to scan are given they are assumed to be the first variable from the parameter of interests of the null model. More... | |
HypoTestInverter (HybridCalculator &hc, RooRealVar *scannedVariable=0, double size=0.05) | |
Constructor from a reference to a HybridCalculator The calculator must be created before by using the S+B model for the null and the B model for the alt If no variable to scan are given they are assumed to be the first variable from the parameter of interests of the null model. More... | |
HypoTestInverter (HypoTestCalculatorGeneric &hc, RooRealVar *scannedVariable=0, double size=0.05) | |
Constructor from a HypoTestCalculatorGeneric The HypoTest calculator must be a FrequentistCalculator or HybridCalculator type Other type of calculators are not supported. More... | |
HypoTestInverter (RooAbsData &data, ModelConfig &sb, ModelConfig &b, RooRealVar *scannedVariable=0, ECalculatorType type=kFrequentist, double size=0.05) | |
Constructor from a model for B model and a model for S+B. More... | |
virtual | ~HypoTestInverter () |
destructor (delete the HypoTestInverterResult) More... | |
void | Clear () |
delete contained result and graph More... | |
virtual Double_t | ConfidenceLevel () const |
Get the Confidence level for the test. More... | |
HypoTestCalculatorGeneric * | GetHypoTestCalculator () const |
virtual HypoTestInverterResult * | GetInterval () const |
Run a fixed scan or the automatic scan depending on the configuration. More... | |
SamplingDistribution * | GetLowerLimitDistribution (bool rebuild=false, int nToys=100) |
get the distribution of lower limit if rebuild = false (default) it will re-use the results of the scan done for obtained the observed limit and no extra toys will be generated if rebuild a new set of B toys will be done and the procedure will be repeated for each toy More... | |
TestStatistic * | GetTestStatistic () const |
return the test statistic which is or will be used by the class More... | |
SamplingDistribution * | GetUpperLimitDistribution (bool rebuild=false, int nToys=100) |
get the distribution of lower limit if rebuild = false (default) it will re-use the results of the scan done for obtained the observed limit and no extra toys will be generated if rebuild a new set of B toys will be done and the procedure will be repeated for each toy The nuisance parameter value used for rebuild is the current one in the model so it is user responsibility to set to the desired value (nomi More... | |
SamplingDistribution * | RebuildDistributions (bool isUpper=true, int nToys=100, TList *clsDist=0, TList *clsbDist=0, TList *clbDist=0, const char *outputfile="HypoTestInverterRebuiltDist.root") |
rebuild the sampling distributions by generating some toys and find for each of them a new upper limit Return the upper limit distribution and optionally also the pValue distributions for Cls, Clsb and Clbxs as a TList for each scanned point The method uses the present parameter value. More... | |
bool | RunFixedScan (int nBins, double xMin, double xMax, bool scanLog=false) const |
Run a fixed scan. More... | |
bool | RunLimit (double &limit, double &limitErr, double absTol=0, double relTol=0, const double *hint=0) const |
Run an automatic scan until the desired accuracy is reached. More... | |
bool | RunOnePoint (double thisX, bool adaptive=false, double clTarget=-1) const |
run only one point at the given POI value More... | |
void | SetAutoScan () |
Use automatic scanning, i.e. adaptive. More... | |
virtual void | SetConfidenceLevel (Double_t cl) |
set the confidence level for the interval (e.g. 0.95 for a 95% Confidence Interval) More... | |
virtual void | SetData (RooAbsData &) |
Set the DataSet ( add to the the workspace if not already there ?) More... | |
void | SetFixedScan (int nBins, double xMin=1, double xMax=-1, bool scanLog=false) |
Set up to perform a fixed scan. More... | |
void | SetMaximumToys (int ntoys) |
virtual void | SetModel (const ModelConfig &) |
Set the Model. More... | |
void | SetNumErr (double err) |
virtual void | SetTestSize (Double_t size) |
set the size of the test (rate of Type I error) ( e.g. 0.05 for a 95% Confidence Interval) More... | |
bool | SetTestStatistic (TestStatistic &stat) |
set the test statistic to use More... | |
void | SetVerbose (int level=1) |
virtual Double_t | Size () const |
Get the size of the test (eg. rate of Type I error) More... | |
void | UseCLs (bool on=true) |
Public Member Functions inherited from RooStats::IntervalCalculator | |
virtual | ~IntervalCalculator () |
virtual Double_t | ConfidenceLevel () const =0 |
Get the Confidence level for the test. More... | |
virtual ConfInterval * | GetInterval () const =0 |
Main interface to get a ConfInterval, pure virtual. More... | |
virtual void | SetConfidenceLevel (Double_t cl)=0 |
set the confidence level for the interval (e.g. 0.95 for a 95% Confidence Interval) More... | |
virtual void | SetData (RooAbsData &)=0 |
Set the DataSet ( add to the the workspace if not already there ?) More... | |
virtual void | SetModel (const ModelConfig &)=0 |
Set the Model. More... | |
virtual void | SetTestSize (Double_t size)=0 |
set the size of the test (rate of Type I error) ( e.g. 0.05 for a 95% Confidence Interval) More... | |
virtual Double_t | Size () const =0 |
Get the size of the test (eg. rate of Type I error) More... | |
Static Public Member Functions | |
static void | SetCloseProof (Bool_t flag) |
set flag to close proof for every new run More... | |
Protected Member Functions | |
HypoTestInverter (const HypoTestInverter &rhs) | |
copy-constructor NOTE: this class does not copy the contained result and the HypoTestCalculator, but only the pointers It requires the original HTI to be alive More... | |
void | CreateResults () const |
create a new HypoTestInverterResult to hold all computed results More... | |
HypoTestResult * | Eval (HypoTestCalculatorGeneric &hc, bool adaptive, double clsTarget) const |
Run the Hypothesis test at a previous configured point (internal function called by RunOnePoint) More... | |
HypoTestInverter & | operator= (const HypoTestInverter &rhs) |
assignment operator NOTE: this class does not copy the contained result and the HypoTestCalculator, but only the pointers It requires the original HTI to be alive More... | |
Static Protected Member Functions | |
static void | CheckInputModels (const HypoTestCalculatorGeneric &hc, const RooRealVar &scanVar) |
check the model given the given hypotestcalculator More... | |
static RooRealVar * | GetVariableToScan (const HypoTestCalculatorGeneric &hc) |
get the variable to scan try first with null model if not go to alternate model More... | |
Private Attributes | |
ECalculatorType | fCalcType |
HypoTestCalculatorGeneric * | fCalculator0 |
std::unique_ptr< HypoTestCalculatorGeneric > | fHC |
std::unique_ptr< TGraphErrors > | fLimitPlot |
int | fMaxToys |
int | fNBins |
double | fNumErr |
HypoTestInverterResult * | fResults |
bool | fScanLog |
RooRealVar * | fScannedVariable |
pointer to the generic hypotest calculator used More... | |
double | fSize |
int | fTotalToysRun |
plot of limits More... | |
bool | fUseCLs |
int | fVerbose |
double | fXmax |
double | fXmin |
Static Private Attributes | |
static double | fgAbsAccuracy = 0.05 |
static std::string | fgAlgo = "logSecant" |
static double | fgCLAccuracy = 0.005 |
static bool | fgCloseProof = false |
static unsigned int | fgNToys = 500 |
static double | fgRelAccuracy = 0.05 |
#include <RooStats/HypoTestInverter.h>
Enumerator | |
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kUndefined | |
kHybrid | |
kFrequentist | |
kAsymptotic |
Definition at line 40 of file HypoTestInverter.h.
HypoTestInverter::HypoTestInverter | ( | ) |
default constructor (doesn't do anything)
Definition at line 168 of file HypoTestInverter.cxx.
HypoTestInverter::HypoTestInverter | ( | HypoTestCalculatorGeneric & | hc, |
RooRealVar * | scannedVariable = 0 , |
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double | size = 0.05 |
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Constructor from a HypoTestCalculatorGeneric The HypoTest calculator must be a FrequentistCalculator or HybridCalculator type Other type of calculators are not supported.
The calculator must be created before by using the S+B model for the null and the B model for the alt If no variable to scan are given they are assumed to be the first variable from the parameter of interests of the null model
Definition at line 193 of file HypoTestInverter.cxx.
HypoTestInverter::HypoTestInverter | ( | HybridCalculator & | hc, |
RooRealVar * | scannedVariable = 0 , |
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double | size = 0.05 |
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Constructor from a reference to a HybridCalculator The calculator must be created before by using the S+B model for the null and the B model for the alt If no variable to scan are given they are assumed to be the first variable from the parameter of interests of the null model.
Definition at line 246 of file HypoTestInverter.cxx.
HypoTestInverter::HypoTestInverter | ( | FrequentistCalculator & | hc, |
RooRealVar * | scannedVariable, | ||
double | size = 0.05 |
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) |
Constructor from a reference to a FrequentistCalculator The calculator must be created before by using the S+B model for the null and the B model for the alt If no variable to scan are given they are assumed to be the first variable from the parameter of interests of the null model.
Definition at line 279 of file HypoTestInverter.cxx.
HypoTestInverter::HypoTestInverter | ( | AsymptoticCalculator & | hc, |
RooRealVar * | scannedVariable, | ||
double | size = 0.05 |
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) |
Constructor from a reference to a AsymptoticCalculator The calculator must be created before by using the S+B model for the null and the B model for the alt If no variable to scan are given they are assumed to be the first variable from the parameter of interests of the null model.
Definition at line 311 of file HypoTestInverter.cxx.
HypoTestInverter::HypoTestInverter | ( | RooAbsData & | data, |
ModelConfig & | sbModel, | ||
ModelConfig & | bModel, | ||
RooRealVar * | scannedVariable = 0 , |
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ECalculatorType | type = kFrequentist , |
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double | size = 0.05 |
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) |
Constructor from a model for B model and a model for S+B.
An HypoTestCalculator (Hybrid of Frequentis) will be created using the S+B model as the null and the B model as the alternate If no variable to scan are given they are assumed to be the first variable from the parameter of interests of the null model
Definition at line 344 of file HypoTestInverter.cxx.
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destructor (delete the HypoTestInverterResult)
Definition at line 417 of file HypoTestInverter.cxx.
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copy-constructor NOTE: this class does not copy the contained result and the HypoTestCalculator, but only the pointers It requires the original HTI to be alive
Definition at line 380 of file HypoTestInverter.cxx.
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check the model given the given hypotestcalculator
Definition at line 128 of file HypoTestInverter.cxx.
void HypoTestInverter::Clear | ( | ) |
delete contained result and graph
Definition at line 450 of file HypoTestInverter.cxx.
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Get the Confidence level for the test.
Implements RooStats::IntervalCalculator.
Definition at line 117 of file HypoTestInverter.h.
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create a new HypoTestInverterResult to hold all computed results
Definition at line 459 of file HypoTestInverter.cxx.
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Run the Hypothesis test at a previous configured point (internal function called by RunOnePoint)
Definition at line 522 of file HypoTestInverter.cxx.
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Definition at line 124 of file HypoTestInverter.h.
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Run a fixed scan or the automatic scan depending on the configuration.
Return if needed a copy of the result object which will be managed by the user.
Implements RooStats::IntervalCalculator.
Definition at line 491 of file HypoTestInverter.cxx.
SamplingDistribution * HypoTestInverter::GetLowerLimitDistribution | ( | bool | rebuild = false , |
int | nToys = 100 |
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get the distribution of lower limit if rebuild = false (default) it will re-use the results of the scan done for obtained the observed limit and no extra toys will be generated if rebuild a new set of B toys will be done and the procedure will be repeated for each toy
Definition at line 1038 of file HypoTestInverter.cxx.
TestStatistic * HypoTestInverter::GetTestStatistic | ( | void | ) | const |
return the test statistic which is or will be used by the class
Definition at line 426 of file HypoTestInverter.cxx.
SamplingDistribution * HypoTestInverter::GetUpperLimitDistribution | ( | bool | rebuild = false , |
int | nToys = 100 |
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get the distribution of lower limit if rebuild = false (default) it will re-use the results of the scan done for obtained the observed limit and no extra toys will be generated if rebuild a new set of B toys will be done and the procedure will be repeated for each toy The nuisance parameter value used for rebuild is the current one in the model so it is user responsibility to set to the desired value (nomi
Definition at line 1065 of file HypoTestInverter.cxx.
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get the variable to scan try first with null model if not go to alternate model
Definition at line 107 of file HypoTestInverter.cxx.
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assignment operator NOTE: this class does not copy the contained result and the HypoTestCalculator, but only the pointers It requires the original HTI to be alive
Definition at line 395 of file HypoTestInverter.cxx.
SamplingDistribution * HypoTestInverter::RebuildDistributions | ( | bool | isUpper = true , |
int | nToys = 100 , |
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TList * | clsDist = 0 , |
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TList * | clsbDist = 0 , |
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TList * | clbDist = 0 , |
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const char * | outputfile = "HypoTestInverterRebuiltDist.root" |
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rebuild the sampling distributions by generating some toys and find for each of them a new upper limit Return the upper limit distribution and optionally also the pValue distributions for Cls, Clsb and Clbxs as a TList for each scanned point The method uses the present parameter value.
It is user responsibility to give the current parameters to rebuild the distributions It returns a upper or lower limit distribution depending on the isUpper flag, however it computes also the lower limit distribution and it is saved in the output file as an histogram
Definition at line 1097 of file HypoTestInverter.cxx.
bool HypoTestInverter::RunFixedScan | ( | int | nBins, |
double | xMin, | ||
double | xMax, | ||
bool | scanLog = false |
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) | const |
Run a fixed scan.
Run a Fixed scan in npoints between min and max.
[in] | nBins | Number of points to scan. |
[in] | xMin | Lower limit of range to be scanned. |
[in] | xMax | Upper limit of range to be scanned. |
[in] | scanLog | Run in logarithmic steps along x. |
Definition at line 605 of file HypoTestInverter.cxx.
bool HypoTestInverter::RunLimit | ( | double & | limit, |
double & | limitErr, | ||
double | absAccuracy = 0 , |
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double | relAccuracy = 0 , |
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const double * | hint = 0 |
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) | const |
Run an automatic scan until the desired accuracy is reached.
Start by default from the full interval (min,max) of the POI and then via bisection find the line crossing the target line. Optionally, a hint can be provided and the scan will be done closer to that value. If by bisection the desired accuracy will not be reached, a fit to the points is performed.
[out] | limit | The limit. |
[out] | limitErr | The error of the limit. |
[in] | absAccuracy | Desired absolute accuracy. |
[in] | relAccuracy | Desired relative accuracy. |
[in] | hint | Hint to start from or nullptr for no hint. |
Definition at line 772 of file HypoTestInverter.cxx.
bool HypoTestInverter::RunOnePoint | ( | double | thisX, |
bool | adaptive = false , |
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double | clTarget = -1 |
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) | const |
run only one point at the given POI value
Definition at line 672 of file HypoTestInverter.cxx.
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Use automatic scanning, i.e. adaptive.
Definition at line 89 of file HypoTestInverter.h.
set flag to close proof for every new run
Definition at line 99 of file HypoTestInverter.cxx.
set the confidence level for the interval (e.g. 0.95 for a 95% Confidence Interval)
Implements RooStats::IntervalCalculator.
Definition at line 113 of file HypoTestInverter.h.
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Set the DataSet ( add to the the workspace if not already there ?)
Implements RooStats::IntervalCalculator.
Definition at line 1084 of file HypoTestInverter.cxx.
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Set up to perform a fixed scan.
[in] | nBins | Number of points to scan. |
[in] | xMin | Lower limit of range to be scanned. |
[in] | xMax | Upper limit of range to be scanned. |
[in] | scanLog | Run in logarithmic steps along x. |
Definition at line 82 of file HypoTestInverter.h.
Definition at line 144 of file HypoTestInverter.h.
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Set the Model.
Implements RooStats::IntervalCalculator.
Definition at line 108 of file HypoTestInverter.h.
Definition at line 147 of file HypoTestInverter.h.
set the size of the test (rate of Type I error) ( e.g. 0.05 for a 95% Confidence Interval)
Implements RooStats::IntervalCalculator.
Definition at line 111 of file HypoTestInverter.h.
bool HypoTestInverter::SetTestStatistic | ( | TestStatistic & | stat | ) |
set the test statistic to use
Definition at line 438 of file HypoTestInverter.cxx.
Definition at line 141 of file HypoTestInverter.h.
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Get the size of the test (eg. rate of Type I error)
Implements RooStats::IntervalCalculator.
Definition at line 115 of file HypoTestInverter.h.
Definition at line 104 of file HypoTestInverter.h.
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Definition at line 197 of file HypoTestInverter.h.
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Definition at line 188 of file HypoTestInverter.h.
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Definition at line 175 of file HypoTestInverter.h.
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Definition at line 178 of file HypoTestInverter.h.
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Definition at line 174 of file HypoTestInverter.h.
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Definition at line 177 of file HypoTestInverter.h.
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Definition at line 173 of file HypoTestInverter.h.
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Definition at line 176 of file HypoTestInverter.h.
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Definition at line 189 of file HypoTestInverter.h.
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Definition at line 181 of file HypoTestInverter.h.
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Definition at line 186 of file HypoTestInverter.h.
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Definition at line 198 of file HypoTestInverter.h.
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Definition at line 201 of file HypoTestInverter.h.
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Definition at line 191 of file HypoTestInverter.h.
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Definition at line 194 of file HypoTestInverter.h.
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pointer to the generic hypotest calculator used
Definition at line 190 of file HypoTestInverter.h.
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Definition at line 195 of file HypoTestInverter.h.
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plot of limits
Definition at line 185 of file HypoTestInverter.h.
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Definition at line 193 of file HypoTestInverter.h.
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Definition at line 196 of file HypoTestInverter.h.
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Definition at line 200 of file HypoTestInverter.h.
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Definition at line 199 of file HypoTestInverter.h.