Implementation of PDEFoam.

The PDEFoam method is an extension of the PDERS method, which uses self-adapting binning to divide the multi-dimensional phase space in a finite number of hyper-rectangles (boxes).

For a given number of boxes, the binning algorithm adjusts the size and position of the boxes inside the multidimensional phase space, minimizing the variance of the signal and background densities inside the boxes. The binned density information is stored in binary trees, allowing for a very fast and memory-efficient classification of events.

The implementation of the PDEFoam is based on the monte-carlo integration package TFoam included in the analysis package ROOT.

The class TMVA::PDEFoam defines the default interface for the PDEFoam variants:

Per default PDEFoam stores in the cells the number of events (event weights) and therefore acts as an event density estimator. However, the above listed derived classes override this behaviour to implement certain PDEFoam variations.

In order to use PDEFoam the user has to set the density estimator of the type TMVA::PDEFoamDensityBase, which is used to during the foam build-up. The default PDEFoam should be used with PDEFoamEventDensity.

Definition at line 77 of file PDEFoam.h.

Public Member Functions
	PDEFoam ()
	Default constructor for streamer, user should not use it. More...

	PDEFoam (const TString &)
	User constructor, to be employed by the user. More...

virtual	~PDEFoam ()
	Default destructor. More...

void	AddVariableName (const char *s)

void	AddVariableName (TObjString *s)

void	CheckAll (Int_t)
	User utility, miscellaneous and debug. More...

void	Create ()
	Basic initialization of FOAM invoked by the user. More...

void	DeleteBinarySearchTree ()
	Delete the foam's density estimator, which contains the binary search tree. More...

TH1D *	Draw1Dim (ECellValue cell_value, Int_t nbin, PDEFoamKernelBase *kernel=NULL)
	Draws 1-dimensional foam (= histogram) More...

void	FillBinarySearchTree (const Event *ev)
	Insert event to internal foam's density estimator PDEFoamDensityBase. More...

virtual void	FillFoamCells (const Event *ev, Float_t wt)
	This function fills a weight 'wt' into the PDEFoam cell, which corresponds to the given event 'ev'. More...

virtual void	Finalize ()

virtual Float_t	GetCellValue (const std::vector< Float_t > &xvec, ECellValue cv, PDEFoamKernelBase *)
	This function finds the cell, which corresponds to the given untransformed event vector 'xvec' and return its value, which is given by the parameter 'cv'. More...

virtual std::vector< Float_t >	GetCellValue (const std::map< Int_t, Float_t > &xvec, ECellValue cv)
	This function finds all cells, which corresponds to the given (incomplete) untransformed event vector 'xvec' and returns the cell values, according to the parameter 'cv'. More...

virtual Float_t	GetCellValue (const PDEFoamCell *cell, ECellValue cv)
	Returns the cell value of 'cell' corresponding to the given option 'cv'. More...

TString	GetFoamName () const

UInt_t	GetMaxDepth () const

UInt_t	GetNActiveCells () const

UInt_t	GetNCells () const

UInt_t	GetNInActiveCells () const

UInt_t	GetNmin ()

PDEFoamCell *	GetRootCell () const

Int_t	GetTotDim () const

TObjString *	GetVariableName (Int_t idx)

Double_t	GetXmax (Int_t idim) const

Double_t	GetXmin (Int_t idim) const

void	Initialize ()

MsgLogger &	Log () const

void	PrintCell (Long_t iCell=0)
	Prints geometry of and elements of 'iCell', as well as relations to parent and daughter cells. More...

void	PrintCells ()
	Prints geometry of ALL cells of the FOAM. More...

virtual TH2D *	Project2 (Int_t idim1, Int_t idim2, ECellValue cell_value=kValue, PDEFoamKernelBase *kernel=NULL, UInt_t nbin=50)
	Project foam variable idim1 and variable idim2 to histogram. More...

void	ResetCellElements ()
	Remove the cell elements from all cells. More...

void	RootPlot2dim (const TString &filename, TString opt, Bool_t createCanvas=kTRUE, Bool_t colors=kTRUE)
	Debugging tool which plots the cells of a 2-dimensional PDEFoam as rectangles in C++ format readable for ROOT. More...

void	SetDensity (PDEFoamDensityBase *dens)

void	SetDim (Int_t kDim)
	Sets dimension of cubical space. More...

void	SetEvPerBin (Int_t EvPerBin)

void	SetInhiDiv (Int_t, Int_t)
	This can be called before Create, after setting kDim It defines which variables are excluded in the process of the cell division. More...

void	SetMaxDepth (UInt_t maxdepth)

void	SetnBin (Int_t nBin)

void	SetnCells (Long_t nCells)

void	SetNmin (UInt_t val)

void	SetnSampl (Long_t nSampl)

void	SetXmax (Int_t idim, Double_t wmax)
	set upper foam bound in dimension idim More...

void	SetXmin (Int_t idim, Double_t wmin)
	set lower foam bound in dimension idim More...

Float_t	VarTransform (Int_t idim, Float_t x) const

std::vector< Float_t >	VarTransform (const std::vector< Float_t > &invec) const

Float_t	VarTransformInvers (Int_t idim, Float_t x) const

std::vector< Float_t >	VarTransformInvers (const std::vector< Float_t > &invec) const

Public Member Functions inherited from TObject
	TObject ()
	TObject constructor. More...

	TObject (const TObject &object)
	TObject copy ctor. More...

virtual	~TObject ()
	TObject destructor. More...

void	AbstractMethod (const char *method) const
	Use this method to implement an "abstract" method that you don't want to leave purely abstract. More...

virtual void	AppendPad (Option_t *option="")
	Append graphics object to current pad. More...

virtual void	Browse (TBrowser *b)
	Browse object. May be overridden for another default action. More...

ULong_t	CheckedHash ()
	Checked and record whether for this class has a consistent Hash/RecursiveRemove setup (*) and then return the regular Hash value for this object. More...

virtual const char *	ClassName () const
	Returns name of class to which the object belongs. More...

virtual void	Clear (Option_t *="")

virtual TObject *	Clone (const char *newname="") const
	Make a clone of an object using the Streamer facility. More...

virtual Int_t	Compare (const TObject *obj) const
	Compare abstract method. More...

virtual void	Copy (TObject &object) const
	Copy this to obj. More...

virtual void	Delete (Option_t *option="")
	Delete this object. More...

virtual Int_t	DistancetoPrimitive (Int_t px, Int_t py)
	Computes distance from point (px,py) to the object. More...

virtual void	Draw (Option_t *option="")
	Default Draw method for all objects. More...

virtual void	DrawClass () const
	Draw class inheritance tree of the class to which this object belongs. More...

virtual TObject *	DrawClone (Option_t *option="") const
	Draw a clone of this object in the current selected pad for instance with: `gROOT->SetSelectedPad(gPad)`. More...

virtual void	Dump () const
	Dump contents of object on stdout. More...

virtual void	Error (const char method, const char msgfmt,...) const
	Issue error message. More...

virtual void	Execute (const char method, const char params, Int_t *error=0)
	Execute method on this object with the given parameter string, e.g. More...

virtual void	Execute (TMethod method, TObjArray params, Int_t *error=0)
	Execute method on this object with parameters stored in the TObjArray. More...

virtual void	ExecuteEvent (Int_t event, Int_t px, Int_t py)
	Execute action corresponding to an event at (px,py). More...

virtual void	Fatal (const char method, const char msgfmt,...) const
	Issue fatal error message. More...

virtual TObject *	FindObject (const char *name) const
	Must be redefined in derived classes. More...

virtual TObject *	FindObject (const TObject *obj) const
	Must be redefined in derived classes. More...

virtual Option_t *	GetDrawOption () const
	Get option used by the graphics system to draw this object. More...

virtual const char *	GetIconName () const
	Returns mime type name of object. More...

virtual const char *	GetName () const
	Returns name of object. More...

virtual char *	GetObjectInfo (Int_t px, Int_t py) const
	Returns string containing info about the object at position (px,py). More...

virtual Option_t *	GetOption () const

virtual const char *	GetTitle () const
	Returns title of object. More...

virtual UInt_t	GetUniqueID () const
	Return the unique object id. More...

virtual Bool_t	HandleTimer (TTimer *timer)
	Execute action in response of a timer timing out. More...

virtual ULong_t	Hash () const
	Return hash value for this object. More...

Bool_t	HasInconsistentHash () const
	Return true is the type of this object is known to have an inconsistent setup for Hash and RecursiveRemove (i.e. More...

virtual void	Info (const char method, const char msgfmt,...) const
	Issue info message. More...

virtual Bool_t	InheritsFrom (const char *classname) const
	Returns kTRUE if object inherits from class "classname". More...

virtual Bool_t	InheritsFrom (const TClass *cl) const
	Returns kTRUE if object inherits from TClass cl. More...

virtual void	Inspect () const
	Dump contents of this object in a graphics canvas. More...

void	InvertBit (UInt_t f)

virtual Bool_t	IsEqual (const TObject *obj) const
	Default equal comparison (objects are equal if they have the same address in memory). More...

virtual Bool_t	IsFolder () const
	Returns kTRUE in case object contains browsable objects (like containers or lists of other objects). More...

R__ALWAYS_INLINE Bool_t	IsOnHeap () const

virtual Bool_t	IsSortable () const

R__ALWAYS_INLINE Bool_t	IsZombie () const

virtual void	ls (Option_t *option="") const
	The ls function lists the contents of a class on stdout. More...

void	MayNotUse (const char *method) const
	Use this method to signal that a method (defined in a base class) may not be called in a derived class (in principle against good design since a child class should not provide less functionality than its parent, however, sometimes it is necessary). More...

virtual Bool_t	Notify ()
	This method must be overridden to handle object notification. More...

void	Obsolete (const char method, const char asOfVers, const char *removedFromVers) const
	Use this method to declare a method obsolete. More...

void	operator delete (void *ptr)
	Operator delete. More...

void	operator delete[] (void *ptr)
	Operator delete []. More...

void *	operator new (size_t sz)

void *	operator new (size_t sz, void *vp)

void *	operator new[] (size_t sz)

void *	operator new[] (size_t sz, void *vp)

TObject &	operator= (const TObject &rhs)
	TObject assignment operator. More...

virtual void	Paint (Option_t *option="")
	This method must be overridden if a class wants to paint itself. More...

virtual void	Pop ()
	Pop on object drawn in a pad to the top of the display list. More...

virtual void	Print (Option_t *option="") const
	This method must be overridden when a class wants to print itself. More...

virtual Int_t	Read (const char *name)
	Read contents of object with specified name from the current directory. More...

virtual void	RecursiveRemove (TObject *obj)
	Recursively remove this object from a list. More...

void	ResetBit (UInt_t f)

virtual void	SaveAs (const char filename="", Option_t option="") const
	Save this object in the file specified by filename. More...

virtual void	SavePrimitive (std::ostream &out, Option_t *option="")
	Save a primitive as a C++ statement(s) on output stream "out". More...

void	SetBit (UInt_t f, Bool_t set)
	Set or unset the user status bits as specified in f. More...

void	SetBit (UInt_t f)

virtual void	SetDrawOption (Option_t *option="")
	Set drawing option for object. More...

virtual void	SetUniqueID (UInt_t uid)
	Set the unique object id. More...

virtual void	SysError (const char method, const char msgfmt,...) const
	Issue system error message. More...

R__ALWAYS_INLINE Bool_t	TestBit (UInt_t f) const

Int_t	TestBits (UInt_t f) const

virtual void	UseCurrentStyle ()
	Set current style settings in this object This function is called when either TCanvas::UseCurrentStyle or TROOT::ForceStyle have been invoked. More...

virtual void	Warning (const char method, const char msgfmt,...) const
	Issue warning message. More...

virtual Int_t	Write (const char *name=0, Int_t option=0, Int_t bufsize=0)
	Write this object to the current directory. More...

virtual Int_t	Write (const char *name=0, Int_t option=0, Int_t bufsize=0) const
	Write this object to the current directory. More...

Protected Member Functions
	PDEFoam (const PDEFoam &)
	Copy Constructor NOT IMPLEMENTED (NEVER USED) More...

Int_t	CellFill (Int_t, PDEFoamCell *)
	Internal subprogram used by Create. More...

virtual Bool_t	CellValueIsUndefined (PDEFoamCell *)
	Returns true, if the value of the given cell is undefined. More...

Int_t	Divide (PDEFoamCell *)
	Internal subprogram used by Create. More...

Double_t	Eval (Double_t *xRand, Double_t &event_density)
	Internal subprogram. More...

virtual void	Explore (PDEFoamCell *Cell)
	Internal subprogram used by Create. More...

PDEFoamCell *	FindCell (const std::vector< Float_t > &) const
	Find cell that contains 'xvec' (in foam coordinates [0,1]). More...

std::vector< TMVA::PDEFoamCell * >	FindCells (const std::vector< Float_t > &) const
	Find all cells, that contain txvec. More...

std::vector< TMVA::PDEFoamCell * >	FindCells (const std::map< Int_t, Float_t > &) const
	Find all cells, that contain the coordinates specified in txvec. More...

void	FindCells (const std::map< Int_t, Float_t > &, PDEFoamCell , std::vector< PDEFoamCell > &) const
	This is a helper function for std::vector<PDEFoamCell> FindCells(...) and a generalisation of PDEFoamCell FindCell(). More...

Double_t	GetCellElement (const PDEFoamCell *cell, UInt_t i) const
	Returns cell element i of cell 'cell'. More...

PDEFoamDensityBase *	GetDistr () const

void	Grow ()
	Internal subprogram used by Create. More...

void	InitCells ()
	Internal subprogram used by Create. More...

void	MakeAlpha ()
	Internal subprogram used by Create. More...

void	OutputGrow (Bool_t finished=false)
	message logger More...

Long_t	PeekMax ()
	Internal subprogram used by Create. More...

void	SetCellElement (PDEFoamCell *cell, UInt_t i, Double_t value)
	Set cell element i of cell to value. More...

template<typename T >
T	Sqr (T x) const

void	Varedu (Double_t [], Int_t &, Double_t &, Double_t &)
	Internal subprogram used by Create. More...

Protected Member Functions inherited from TObject
virtual void	DoError (int level, const char location, const char fmt, va_list va) const
	Interface to ErrorHandler (protected). More...

void	MakeZombie ()

Protected Attributes
Double_t *	fAlpha

PDEFoamCell **	fCells

Int_t	fDim

PDEFoamDensityBase *	fDistr

EDTSeparation	fDTSeparation

Int_t	fEvPerBin

Bool_t	fFillFoamWithOrigWeights

EFoamType	fFoamType

TObjArray *	fHistEdg

Int_t *	fInhiDiv
	[fDim] Dynamic Mask for cell division More...

Int_t	fLastCe

MsgLogger *	fLogger

Int_t *	fMaskDiv

UInt_t	fMaxDepth

TString	fName

Int_t	fNBin

Int_t	fNCells

UInt_t	fNElements

UInt_t	fNmin

Int_t	fNoAct
	[fDim] Flags for inhibiting cell division More...

Int_t	fNSampl

Bool_t	fPeekMax

TRandom3 *	fPseRan

Double_t *	fRvec

Timer *	fTimer
	distribution of training events More...

TObjArray *	fVariableNames
	timer for graphical output More...

Float_t	fVolFrac

Double_t *	fXmax

Double_t *	fXmin

Friends
class	PDEFoamKernelBase

class	PDEFoamKernelGauss

class	PDEFoamKernelLinN

class	PDEFoamKernelTrivial

Additional Inherited Members
Public Types inherited from TObject
enum	{ kIsOnHeap = 0x01000000, kNotDeleted = 0x02000000, kZombie = 0x04000000, kInconsistent = 0x08000000, kBitMask = 0x00ffffff }

enum	{ kSingleKey = BIT(0), kOverwrite = BIT(1), kWriteDelete = BIT(2) }

enum	EDeprecatedStatusBits { kObjInCanvas = BIT(3) }

enum	EStatusBits { kCanDelete = BIT(0), kMustCleanup = BIT(3), kIsReferenced = BIT(4), kHasUUID = BIT(5), kCannotPick = BIT(6), kNoContextMenu = BIT(8), kInvalidObject = BIT(13) }

Static Public Member Functions inherited from TObject
static Long_t	GetDtorOnly ()
	Return destructor only flag. More...

static Bool_t	GetObjectStat ()
	Get status of object stat flag. More...

static void	SetDtorOnly (void *obj)
	Set destructor only flag. More...

static void	SetObjectStat (Bool_t stat)
	Turn on/off tracking of objects in the TObjectTable. More...

#include <TMVA/PDEFoam.h>

Inheritance diagram for TMVA::PDEFoam:

[legend]

Constructor & Destructor Documentation

◆ PDEFoam() [1/3]

TMVA::PDEFoam::PDEFoam ( const PDEFoam & from )

protected

Copy Constructor NOT IMPLEMENTED (NEVER USED)

Definition at line 210 of file PDEFoam.cxx.

◆ PDEFoam() [2/3]

TMVA::PDEFoam::PDEFoam ( )

Default constructor for streamer, user should not use it.

Definition at line 104 of file PDEFoam.cxx.

◆ PDEFoam() [3/3]

TMVA::PDEFoam::PDEFoam ( const TString & name )

User constructor, to be employed by the user.

Definition at line 143 of file PDEFoam.cxx.

◆ ~PDEFoam()

TMVA::PDEFoam::~PDEFoam ( )

virtual

Default destructor.

Definition at line 185 of file PDEFoam.cxx.

Member Function Documentation

◆ AddVariableName() [1/2]

void TMVA::PDEFoam::AddVariableName ( const char * s )

inline

Definition at line 215 of file PDEFoam.h.

◆ AddVariableName() [2/2]

void TMVA::PDEFoam::AddVariableName ( TObjString * s )

inline

Definition at line 216 of file PDEFoam.h.

◆ CellFill()

Int_t TMVA::PDEFoam::CellFill	(	Int_t	status,
		PDEFoamCell *	parent
	)

protected

Internal subprogram used by Create.

It initializes content of the newly allocated active cell.

Definition at line 390 of file PDEFoam.cxx.

◆ CellValueIsUndefined()

Bool_t TMVA::PDEFoam::CellValueIsUndefined ( PDEFoamCell * )

protectedvirtual

Returns true, if the value of the given cell is undefined.

Default value: kFALSE. This function can be overridden by sub-classes.

Reimplemented in TMVA::PDEFoamTarget.

Definition at line 991 of file PDEFoam.cxx.

◆ CheckAll()

void TMVA::PDEFoam::CheckAll ( Int_t level )

User utility, miscellaneous and debug.

Checks all pointers in the tree of cells. This is useful auto-diagnostic. level=0, no printout, failures causes STOP level=1, printout, failures lead to WARNINGS only

Definition at line 823 of file PDEFoam.cxx.

◆ Create()

void TMVA::PDEFoam::Create ( )

Basic initialization of FOAM invoked by the user.

IMPORTANT: Random number generator and the distribution object has to be provided using SetPseRan and SetRho prior to invoking this initializator!

After the foam is grown, space for 2 variables is reserved in every cell. They are used for filling the foam cells.

Definition at line 293 of file PDEFoam.cxx.

◆ DeleteBinarySearchTree()

void TMVA::PDEFoam::DeleteBinarySearchTree ( )

Delete the foam's density estimator, which contains the binary search tree.

Definition at line 1667 of file PDEFoam.cxx.

◆ Divide()

Int_t TMVA::PDEFoam::Divide ( PDEFoamCell * cell )

protected

Internal subprogram used by Create.

It divides cell iCell into two daughter cells. The iCell is retained and tagged as inactive, daughter cells are appended at the end of the buffer. New vertex is added to list of vertices. List of active cells is updated, iCell removed, two daughters added and their properties set with help of MC sampling (PDEFoam_Explore) Returns Code RC=-1 of buffer limit is reached, fLastCe=fnBuf.

Definition at line 715 of file PDEFoam.cxx.

◆ Draw1Dim()

TH1D * TMVA::PDEFoam::Draw1Dim	(	ECellValue	cell_value,
		Int_t	nbin,
		PDEFoamKernelBase *	kernel = `NULL`
	)

Draws 1-dimensional foam (= histogram)

Parameters:

cell_value - the cell value to draw
nbin - number of bins of result histogram
kernel - a PDEFoam kernel.

Definition at line 1219 of file PDEFoam.cxx.

◆ Eval()

Double_t TMVA::PDEFoam::Eval	(	Double_t *	xRand,
		Double_t &	event_density
	)

protected

Internal subprogram.

Evaluates (training) distribution.

Definition at line 748 of file PDEFoam.cxx.

◆ Explore()

void TMVA::PDEFoam::Explore ( PDEFoamCell * cell )

protectedvirtual

Internal subprogram used by Create.

It explores newly defined cell with help of special short MC sampling. As a result, estimates of kTRUE and drive volume is defined/determined Average and dispersion of the weight distribution will is found along each edge and the best edge (minimum dispersion, best maximum weight) is memorized for future use. The optimal division point for eventual future cell division is determined/recorded. Recorded are also minimum and maximum weight etc. The volume estimate in all (inactive) parent cells is updated. Note that links to parents and initial volume = 1/2 parent has to be already defined prior to calling this routine.

If fNmin > 0 then the total number of (training) events found in the cell during the exploration is stored in the cell. This information is used within PeekMax() to avoid splitting cells which contain less than fNmin events.

Reimplemented in TMVA::PDEFoamDecisionTree.

Definition at line 435 of file PDEFoam.cxx.

◆ FillBinarySearchTree()

void TMVA::PDEFoam::FillBinarySearchTree ( const Event * ev )

Insert event to internal foam's density estimator PDEFoamDensityBase.

Definition at line 1658 of file PDEFoam.cxx.

◆ FillFoamCells()

void TMVA::PDEFoam::FillFoamCells	(	const Event *	ev,
		Float_t	wt
	)

virtual

This function fills a weight 'wt' into the PDEFoam cell, which corresponds to the given event 'ev'.

Per default cell element 0 is filled with the weight 'wt', and cell element 1 is filled with the squared weight. This function can be overridden by a subclass in order to change the values stored in the foam cells.

Reimplemented in TMVA::PDEFoamTarget, TMVA::PDEFoamDiscriminant, and TMVA::PDEFoamEvent.

Definition at line 956 of file PDEFoam.cxx.

◆ Finalize()

virtual void TMVA::PDEFoam::Finalize ( )

inlinevirtual

Reimplemented in TMVA::PDEFoamTarget, and TMVA::PDEFoamDiscriminant.

Definition at line 182 of file PDEFoam.h.

◆ FindCell()

TMVA::PDEFoamCell * TMVA::PDEFoam::FindCell ( const std::vector< Float_t > & xvec ) const

protected

Find cell that contains 'xvec' (in foam coordinates [0,1]).

Loop to find cell that contains 'xvec' starting at root cell, and traversing binary tree to find the cell quickly. Note, that if 'xvec' lies outside the foam, the cell which is nearest to 'xvec' is returned. (The returned pointer should never be NULL.)

Parameters:

xvec - event vector (in foam coordinates [0,1])

Return:

PDEFoam cell corresponding to 'xvec'

Definition at line 1081 of file PDEFoam.cxx.

◆ FindCells() [1/3]

std::vector< TMVA::PDEFoamCell * > TMVA::PDEFoam::FindCells ( const std::vector< Float_t > & txvec ) const

protected

Find all cells, that contain txvec.

This function can be used, when the dimension of the foam is greater than the dimension of txvec. E.g. this is the case for multi-target regression.

Parameters:

txvec - event vector of variables, transformed into foam coordinates [0,1]. The size of txvec can be smaller than the dimension of the foam.

Return value:

vector of cells, that fit txvec

Definition at line 1166 of file PDEFoam.cxx.

◆ FindCells() [2/3]

std::vector< TMVA::PDEFoamCell * > TMVA::PDEFoam::FindCells ( const std::map< Int_t, Float_t > & txvec ) const

protected

Find all cells, that contain the coordinates specified in txvec.

The key in 'txvec' is the dimension, and the corresponding value is the coordinate. Note, that not all coordinates have to be specified in txvec.

Parameters:

txvec - map of coordinates (transformed into foam coordinates [0,1])

Return value:

vector of cells, that fit txvec

Definition at line 1197 of file PDEFoam.cxx.

◆ FindCells() [3/3]

void TMVA::PDEFoam::FindCells	(	const std::map< Int_t, Float_t > &	txvec,
		PDEFoamCell *	cell,
		std::vector< PDEFoamCell *> &	cells
	)		const

protected

This is a helper function for std::vector<PDEFoamCell*> FindCells(...) and a generalisation of PDEFoamCell* FindCell().

It saves in 'cells' all cells, which contain the coordinates specifies in 'txvec'. Note, that not all coordinates have to be specified in 'txvec'.

Parameters:

txvec - event vector in foam coordinates [0,1]. The key is the dimension and the value is the event coordinate. Note, that not all coordinates have to be specified.
cell - cell to start searching with (usually root cell fCells[0])
cells - list of cells that were found

Definition at line 1119 of file PDEFoam.cxx.

◆ GetCellElement()

Double_t TMVA::PDEFoam::GetCellElement	(	const PDEFoamCell *	cell,
		UInt_t	i
	)		const

protected

Returns cell element i of cell 'cell'.

If the cell has no elements or the index 'i' is out of range, than 0 is returned.

Definition at line 1417 of file PDEFoam.cxx.

◆ GetCellValue() [1/3]

Float_t TMVA::PDEFoam::GetCellValue	(	const std::vector< Float_t > &	xvec,
		ECellValue	cv,
		PDEFoamKernelBase *	kernel
	)

virtual

This function finds the cell, which corresponds to the given untransformed event vector 'xvec' and return its value, which is given by the parameter 'cv'.

If kernel != NULL, then PDEFoamKernelBase::Estimate() is called on the transformed event variables.

Parameters:

xvec - event vector (untransformed, [fXmin,fXmax])
cv - the cell value to return
kernel - PDEFoam kernel estimator. If NULL is given, than the pure cell value is returned

Return:

The cell value, corresponding to 'xvec', estimated by the given kernel.

Reimplemented in TMVA::PDEFoamTarget.

Definition at line 1017 of file PDEFoam.cxx.

◆ GetCellValue() [2/3]

std::vector< Float_t > TMVA::PDEFoam::GetCellValue	(	const std::map< Int_t, Float_t > &	xvec,
		ECellValue	cv
	)

virtual

This function finds all cells, which corresponds to the given (incomplete) untransformed event vector 'xvec' and returns the cell values, according to the parameter 'cv'.

Parameters:

xvec - map for the untransformed vector. The key (Int_t) is the dimension, and the value (Float_t) is the event coordinate. Note that not all coordinates have to be specified.
cv - cell values to return

Return:

cell values from all cells that were found

Reimplemented in TMVA::PDEFoamMultiTarget.

Definition at line 1044 of file PDEFoam.cxx.

◆ GetCellValue() [3/3]

Float_t TMVA::PDEFoam::GetCellValue	(	const PDEFoamCell *	cell,
		ECellValue	cv
	)

virtual

Returns the cell value of 'cell' corresponding to the given option 'cv'.

This function should be overridden by the subclass in order to specify which cell elements to return for a given cell value 'cv'. By default kValue returns cell element 0, and kValueError returns cell element 1.

Definition at line 1357 of file PDEFoam.cxx.

◆ GetDistr()

PDEFoamDensityBase* TMVA::PDEFoam::GetDistr ( ) const

inlineprotected

Definition at line 156 of file PDEFoam.h.

◆ GetFoamName()

TString TMVA::PDEFoam::GetFoamName ( ) const

inline

Definition at line 196 of file PDEFoam.h.

◆ GetMaxDepth()

UInt_t TMVA::PDEFoam::GetMaxDepth ( ) const

inline

Definition at line 206 of file PDEFoam.h.

◆ GetNActiveCells()

UInt_t TMVA::PDEFoam::GetNActiveCells ( ) const

inline

Definition at line 197 of file PDEFoam.h.

◆ GetNCells()

UInt_t TMVA::PDEFoam::GetNCells ( ) const

inline

Definition at line 199 of file PDEFoam.h.

◆ GetNInActiveCells()

UInt_t TMVA::PDEFoam::GetNInActiveCells ( ) const

inline

Definition at line 198 of file PDEFoam.h.

◆ GetNmin()

UInt_t TMVA::PDEFoam::GetNmin ( )

inline

Definition at line 204 of file PDEFoam.h.

◆ GetRootCell()

PDEFoamCell* TMVA::PDEFoam::GetRootCell ( ) const

inline

Definition at line 200 of file PDEFoam.h.

◆ GetTotDim()

Int_t TMVA::PDEFoam::GetTotDim ( ) const

inline

Definition at line 195 of file PDEFoam.h.

◆ GetVariableName()

TObjString* TMVA::PDEFoam::GetVariableName ( Int_t idx )

inline

Definition at line 217 of file PDEFoam.h.

◆ GetXmax()

Double_t TMVA::PDEFoam::GetXmax ( Int_t idim ) const

inline

Definition at line 212 of file PDEFoam.h.

◆ GetXmin()

Double_t TMVA::PDEFoam::GetXmin ( Int_t idim ) const

inline

Definition at line 211 of file PDEFoam.h.

◆ Grow()

void TMVA::PDEFoam::Grow ( )

protected

Internal subprogram used by Create.

It grow new cells by the binary division process. This function is overridden by the PDEFoam class to stop the foam buildup process if one of the cut conditions stop the cell split.

Definition at line 768 of file PDEFoam.cxx.

◆ InitCells()

void TMVA::PDEFoam::InitCells ( )

protected

Internal subprogram used by Create.

It initializes "root part" of the FOAM of the tree of cells.

Definition at line 357 of file PDEFoam.cxx.

◆ Initialize()

void TMVA::PDEFoam::Initialize ( )

inline

Definition at line 171 of file PDEFoam.h.

◆ Log()

MsgLogger& TMVA::PDEFoam::Log ( ) const

inline

Definition at line 238 of file PDEFoam.h.

◆ MakeAlpha()

void TMVA::PDEFoam::MakeAlpha ( )

protected

Internal subprogram used by Create.

Provides random vector Alpha 0< Alpha(i) < 1

Definition at line 638 of file PDEFoam.cxx.

◆ OutputGrow()

void TMVA::PDEFoam::OutputGrow ( Bool_t finished = false )

protected

message logger

Overridden function of PDEFoam to avoid native foam output.

Draw TMVA-process bar instead.

Definition at line 1461 of file PDEFoam.cxx.

◆ PeekMax()

Long_t TMVA::PDEFoam::PeekMax ( )

protected

Internal subprogram used by Create.

It finds cell with maximal driver integral for the purpose of the division. This function is overridden by the PDEFoam Class to apply cuts on the number of events in the cell (fNmin) and the cell tree depth (GetMaxDepth() > 0) during cell buildup.

Definition at line 652 of file PDEFoam.cxx.

◆ PrintCell()

void TMVA::PDEFoam::PrintCell ( Long_t iCell = 0 )

Prints geometry of and elements of 'iCell', as well as relations to parent and daughter cells.

Definition at line 896 of file PDEFoam.cxx.

◆ PrintCells()

void TMVA::PDEFoam::PrintCells ( void )

Prints geometry of ALL cells of the FOAM.

Definition at line 943 of file PDEFoam.cxx.

◆ Project2()

TH2D * TMVA::PDEFoam::Project2	(	Int_t	idim1,
		Int_t	idim2,
		ECellValue	cell_value = `kValue`,
		PDEFoamKernelBase *	kernel = `NULL`,
		UInt_t	nbin = `50`
	)

virtual

Project foam variable idim1 and variable idim2 to histogram.

Parameters:

idim1, idim2 - dimensions to project to
cell_value - the cell value to draw
kernel - a PDEFoam kernel (optional). If NULL is given, the kernel is ignored and the pure cell values are plotted.
nbin - number of bins in x and y direction of result histogram (optional, default is 50).

Returns: a 2-dimensional histogram

Reimplemented in TMVA::PDEFoamDiscriminant.

Definition at line 1271 of file PDEFoam.cxx.

◆ ResetCellElements()

void TMVA::PDEFoam::ResetCellElements ( )

Remove the cell elements from all cells.

Definition at line 972 of file PDEFoam.cxx.

◆ RootPlot2dim()

void TMVA::PDEFoam::RootPlot2dim	(	const TString &	filename,
		TString	opt,
		Bool_t	createCanvas = `kTRUE`,
		Bool_t	colors = `kTRUE`
	)

Debugging tool which plots the cells of a 2-dimensional PDEFoam as rectangles in C++ format readable for ROOT.

Parameters:

filename - filename of output root macro
opt - cell_value, rms, rms_ov_mean If cell_value is set, the following values will be filled into the result histogram:
- number of events - in case of classification with 2 separate foams or multi-target regression
- discriminator - in case of classification with one unified foam
- target - in case of mono-target regression If none of {cell_value, rms, rms_ov_mean} is given, the cells will not be filled. If 'opt' contains the string 'cellnumber', the index of each cell is draw in addition.
createCanvas - whether to create a new canvas or not
colors - whether to fill cells with colors or shades of grey

Example:

The following commands load a mono-target regression foam from file 'foam.root' and create a ROOT macro 'output.C', which draws all PDEFoam cells with little boxes. The latter are filled with colors according to the target value stored in the cell. Also the cell number is drawn.

TFile file("foam.root"); TMVA::PDEFoam foam = (TMVA::PDEFoam) gDirectory->Get("MonoTargetRegressionFoam"); foam->RootPlot2dim("output.C","cell_value,cellnumber"); gROOT->Macro("output.C");

Definition at line 1512 of file PDEFoam.cxx.

◆ SetCellElement()

void TMVA::PDEFoam::SetCellElement	(	PDEFoamCell *	cell,
		UInt_t	i,
		Double_t	value
	)

protected

Set cell element i of cell to value.

If the cell element i does not exist, it is created.

Definition at line 1433 of file PDEFoam.cxx.

◆ SetDensity()

void TMVA::PDEFoam::SetDensity ( PDEFoamDensityBase * dens )

inline

Definition at line 192 of file PDEFoam.h.

◆ SetDim()

void TMVA::PDEFoam::SetDim ( Int_t kDim )

Sets dimension of cubical space.

Definition at line 251 of file PDEFoam.cxx.

◆ SetEvPerBin()

void TMVA::PDEFoam::SetEvPerBin ( Int_t EvPerBin )

inline

Definition at line 190 of file PDEFoam.h.

◆ SetInhiDiv()

void TMVA::PDEFoam::SetInhiDiv	(	Int_t	iDim,
		Int_t	inhiDiv
	)

This can be called before Create, after setting kDim It defines which variables are excluded in the process of the cell division.

For example 'FoamX->SetInhiDiv(1, 1);' inhibits division of y-variable.

Definition at line 803 of file PDEFoam.cxx.

◆ SetMaxDepth()

void TMVA::PDEFoam::SetMaxDepth ( UInt_t maxdepth )

inline

Definition at line 205 of file PDEFoam.h.

◆ SetnBin()

void TMVA::PDEFoam::SetnBin ( Int_t nBin )

inline

Definition at line 189 of file PDEFoam.h.

◆ SetnCells()

void TMVA::PDEFoam::SetnCells ( Long_t nCells )

inline

Definition at line 187 of file PDEFoam.h.

◆ SetNmin()

void TMVA::PDEFoam::SetNmin ( UInt_t val )

inline

Definition at line 203 of file PDEFoam.h.

◆ SetnSampl()

void TMVA::PDEFoam::SetnSampl ( Long_t nSampl )

inline

Definition at line 188 of file PDEFoam.h.

◆ SetXmax()

void TMVA::PDEFoam::SetXmax	(	Int_t	idim,
		Double_t	wmax
	)

set upper foam bound in dimension idim

Definition at line 277 of file PDEFoam.cxx.

◆ SetXmin()

void TMVA::PDEFoam::SetXmin	(	Int_t	idim,
		Double_t	wmin
	)

set lower foam bound in dimension idim

Definition at line 266 of file PDEFoam.cxx.

◆ Sqr()

template<typename T >

T TMVA::PDEFoam::Sqr ( T x ) const

inlineprotected

Definition at line 159 of file PDEFoam.h.

◆ Varedu()

void TMVA::PDEFoam::Varedu	(	Double_t	[],
		Int_t &	,
		Double_t &	,
		Double_t &
	)

protected

Internal subprogram used by Create.

In determines the best edge candidate and the position of the cell division plane in case of the variance reduction for future cell division, using results of the MC exploration run stored in fHistEdg

Definition at line 571 of file PDEFoam.cxx.

◆ VarTransform() [1/2]

Float_t TMVA::PDEFoam::VarTransform	(	Int_t	idim,
		Float_t	x
	)		const

inline

Definition at line 279 of file PDEFoam.h.

◆ VarTransform() [2/2]

std::vector< Float_t > TMVA::PDEFoam::VarTransform ( const std::vector< Float_t > & invec ) const

inline

Definition at line 286 of file PDEFoam.h.

◆ VarTransformInvers() [1/2]

Float_t TMVA::PDEFoam::VarTransformInvers	(	Int_t	idim,
		Float_t	x
	)		const

inline

Definition at line 296 of file PDEFoam.h.

◆ VarTransformInvers() [2/2]

std::vector< Float_t > TMVA::PDEFoam::VarTransformInvers ( const std::vector< Float_t > & invec ) const

inline

Definition at line 303 of file PDEFoam.h.

Friends And Related Function Documentation

◆ PDEFoamKernelBase

friend class PDEFoamKernelBase

friend

Definition at line 265 of file PDEFoam.h.

◆ PDEFoamKernelGauss

friend class PDEFoamKernelGauss

friend

Definition at line 268 of file PDEFoam.h.

◆ PDEFoamKernelLinN

friend class PDEFoamKernelLinN

friend

Definition at line 267 of file PDEFoam.h.

◆ PDEFoamKernelTrivial

friend class PDEFoamKernelTrivial

friend

Definition at line 266 of file PDEFoam.h.

Member Data Documentation

◆ fAlpha

Double_t* TMVA::PDEFoam::fAlpha

protected

Definition at line 101 of file PDEFoam.h.

◆ fCells

PDEFoamCell** TMVA::PDEFoam::fCells

protected

Definition at line 94 of file PDEFoam.h.

◆ fDim

Int_t TMVA::PDEFoam::fDim

protected

Definition at line 82 of file PDEFoam.h.

◆ fDistr

PDEFoamDensityBase* TMVA::PDEFoam::fDistr

protected

Definition at line 113 of file PDEFoam.h.

◆ fDTSeparation

EDTSeparation TMVA::PDEFoam::fDTSeparation

protected

Definition at line 111 of file PDEFoam.h.

◆ fEvPerBin

Int_t TMVA::PDEFoam::fEvPerBin

protected

Definition at line 87 of file PDEFoam.h.

◆ fFillFoamWithOrigWeights

Bool_t TMVA::PDEFoam::fFillFoamWithOrigWeights

protected

Definition at line 110 of file PDEFoam.h.

◆ fFoamType

EFoamType TMVA::PDEFoam::fFoamType

protected

Definition at line 103 of file PDEFoam.h.

◆ fHistEdg

TObjArray* TMVA::PDEFoam::fHistEdg

protected

Definition at line 96 of file PDEFoam.h.

◆ fInhiDiv

Int_t* TMVA::PDEFoam::fInhiDiv

protected

[fDim] Dynamic Mask for cell division

Definition at line 90 of file PDEFoam.h.

◆ fLastCe

Int_t TMVA::PDEFoam::fLastCe

protected

Definition at line 93 of file PDEFoam.h.

◆ fLogger

MsgLogger* TMVA::PDEFoam::fLogger

mutableprotected

Definition at line 116 of file PDEFoam.h.

◆ fMaskDiv

Int_t* TMVA::PDEFoam::fMaskDiv

protected

Definition at line 89 of file PDEFoam.h.

◆ fMaxDepth

UInt_t TMVA::PDEFoam::fMaxDepth

protected

Definition at line 108 of file PDEFoam.h.

◆ fName

TString TMVA::PDEFoam::fName

protected

Definition at line 81 of file PDEFoam.h.

◆ fNBin

Int_t TMVA::PDEFoam::fNBin

protected

Definition at line 85 of file PDEFoam.h.

◆ fNCells

Int_t TMVA::PDEFoam::fNCells

protected

Definition at line 83 of file PDEFoam.h.

◆ fNElements

UInt_t TMVA::PDEFoam::fNElements

protected

Definition at line 106 of file PDEFoam.h.

◆ fNmin

UInt_t TMVA::PDEFoam::fNmin

protected

Definition at line 107 of file PDEFoam.h.

◆ fNoAct

Int_t TMVA::PDEFoam::fNoAct

protected

[fDim] Flags for inhibiting cell division

Definition at line 92 of file PDEFoam.h.

◆ fNSampl

Int_t TMVA::PDEFoam::fNSampl

protected

Definition at line 86 of file PDEFoam.h.

◆ fPeekMax

Bool_t TMVA::PDEFoam::fPeekMax

protected

Definition at line 112 of file PDEFoam.h.

◆ fPseRan

TRandom3* TMVA::PDEFoam::fPseRan

protected

Definition at line 99 of file PDEFoam.h.

◆ fRvec

Double_t* TMVA::PDEFoam::fRvec

protected

Definition at line 97 of file PDEFoam.h.

◆ fTimer

Timer* TMVA::PDEFoam::fTimer

protected

distribution of training events

Definition at line 114 of file PDEFoam.h.

◆ fVariableNames

TObjArray* TMVA::PDEFoam::fVariableNames

protected

timer for graphical output

Definition at line 115 of file PDEFoam.h.

◆ fVolFrac

Float_t TMVA::PDEFoam::fVolFrac

protected

Definition at line 109 of file PDEFoam.h.

◆ fXmax

Double_t* TMVA::PDEFoam::fXmax

protected

Definition at line 105 of file PDEFoam.h.

◆ fXmin

Double_t* TMVA::PDEFoam::fXmin

protected

Definition at line 104 of file PDEFoam.h.

Libraries for TMVA::PDEFoam:

[legend]

Public Member Functions

Protected Member Functions

Protected Attributes

Friends

Additional Inherited Members

Constructor & Destructor Documentation

◆ PDEFoam() [1/3]

◆ PDEFoam() [2/3]

◆ PDEFoam() [3/3]

◆ ~PDEFoam()

Member Function Documentation

◆ AddVariableName() [1/2]

◆ AddVariableName() [2/2]

◆ CellFill()

◆ CellValueIsUndefined()

◆ CheckAll()

◆ Create()

◆ DeleteBinarySearchTree()

◆ Divide()

◆ Draw1Dim()

◆ Eval()

◆ Explore()

◆ FillBinarySearchTree()

◆ FillFoamCells()

◆ Finalize()

◆ FindCell()

◆ FindCells() [1/3]

◆ FindCells() [2/3]

◆ FindCells() [3/3]

◆ GetCellElement()

◆ GetCellValue() [1/3]

◆ GetCellValue() [2/3]

◆ GetCellValue() [3/3]

◆ GetDistr()

◆ GetFoamName()

◆ GetMaxDepth()

◆ GetNActiveCells()

◆ GetNCells()

◆ GetNInActiveCells()

◆ GetNmin()

◆ GetRootCell()

◆ GetTotDim()

◆ GetVariableName()

◆ GetXmax()

◆ GetXmin()

◆ Grow()

◆ InitCells()

◆ Initialize()

◆ Log()

◆ MakeAlpha()

◆ OutputGrow()

◆ PeekMax()

◆ PrintCell()

◆ PrintCells()

◆ Project2()

◆ ResetCellElements()

◆ RootPlot2dim()

◆ SetCellElement()

◆ SetDensity()

◆ SetDim()

◆ SetEvPerBin()

◆ SetInhiDiv()

◆ SetMaxDepth()

◆ SetnBin()

◆ SetnCells()

◆ SetNmin()

◆ SetnSampl()

◆ SetXmax()

◆ SetXmin()

◆ Sqr()

◆ Varedu()

◆ VarTransform() [1/2]

◆ VarTransform() [2/2]

◆ VarTransformInvers() [1/2]

◆ VarTransformInvers() [2/2]

Friends And Related Function Documentation

◆ PDEFoamKernelBase

◆ PDEFoamKernelGauss

◆ PDEFoamKernelLinN

◆ PDEFoamKernelTrivial