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rf705_linearmorph.C File Reference

Detailed Description

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Special pdf's: linear interpolation between pdf shapes using the 'Alex Read' algorithm

#include "RooRealVar.h"
#include "RooDataSet.h"
#include "RooGaussian.h"
#include "RooPolynomial.h"
#include "TCanvas.h"
#include "TAxis.h"
#include "RooPlot.h"
#include "TH1.h"
using namespace RooFit;
void rf705_linearmorph()
{
// C r e a t e e n d p o i n t p d f s h a p e s
// ------------------------------------------------------
// Observable
RooRealVar x("x", "x", -20, 20);
// Lower end point shape: a Gaussian
RooRealVar g1mean("g1mean", "g1mean", -10);
RooGaussian g1("g1", "g1", x, g1mean, 2.0);
// Upper end point shape: a Polynomial
RooPolynomial g2("g2", "g2", x, RooArgSet(-0.03, -0.001));
// C r e a t e i n t e r p o l a t i n g p d f
// -----------------------------------------------
// Create interpolation variable
RooRealVar alpha("alpha", "alpha", 0, 1.0);
// Specify sampling density on observable and interpolation variable
x.setBins(1000, "cache");
alpha.setBins(50, "cache");
// Construct interpolating pdf in (x,a) represent g1(x) at a=a_min
// and g2(x) at a=a_max
RooIntegralMorph lmorph("lmorph", "lmorph", g1, g2, x, alpha);
// P l o t i n t e r p o l a t i n g p d f a t v a r i o u s a l p h a
// -----------------------------------------------------------------------------
// Show end points as blue curves
RooPlot *frame1 = x.frame();
g1.plotOn(frame1);
g2.plotOn(frame1);
// Show interpolated shapes in red
alpha.setVal(0.125);
lmorph.plotOn(frame1, LineColor(kRed));
alpha.setVal(0.25);
lmorph.plotOn(frame1, LineColor(kRed));
alpha.setVal(0.375);
lmorph.plotOn(frame1, LineColor(kRed));
alpha.setVal(0.50);
lmorph.plotOn(frame1, LineColor(kRed));
alpha.setVal(0.625);
lmorph.plotOn(frame1, LineColor(kRed));
alpha.setVal(0.75);
lmorph.plotOn(frame1, LineColor(kRed));
alpha.setVal(0.875);
lmorph.plotOn(frame1, LineColor(kRed));
alpha.setVal(0.95);
lmorph.plotOn(frame1, LineColor(kRed));
// S h o w 2 D d i s t r i b u t i o n o f p d f ( x , a l p h a )
// -----------------------------------------------------------------------
// Create 2D histogram
TH1 *hh = lmorph.createHistogram("hh", x, Binning(40), YVar(alpha, Binning(40)));
hh->SetLineColor(kBlue);
// F i t p d f t o d a t a s e t w i t h a l p h a = 0 . 8
// -----------------------------------------------------------------
// Generate a toy dataset at alpha = 0.8
alpha = 0.8;
std::unique_ptr<RooDataSet> data{lmorph.generate(x, 1000)};
// Fit pdf to toy data
lmorph.setCacheAlpha(true);
lmorph.fitTo(*data, Verbose(true), PrintLevel(-1));
// Plot fitted pdf and data overlaid
RooPlot *frame2 = x.frame(Bins(100));
data->plotOn(frame2);
lmorph.plotOn(frame2);
// S c a n - l o g ( L ) v s a l p h a
// -----------------------------------------
// Show scan -log(L) of dataset w.r.t alpha
RooPlot *frame3 = alpha.frame(Bins(100), Range(0.1, 0.9));
// Make 2D pdf of histogram
std::unique_ptr<RooAbsReal> nll{lmorph.createNLL(*data)};
nll->plotOn(frame3, ShiftToZero());
lmorph.setCacheAlpha(false);
TCanvas *c = new TCanvas("rf705_linearmorph", "rf705_linearmorph", 800, 800);
c->Divide(2, 2);
c->cd(1);
gPad->SetLeftMargin(0.15);
frame1->GetYaxis()->SetTitleOffset(1.6);
frame1->Draw();
c->cd(2);
gPad->SetLeftMargin(0.20);
hh->GetZaxis()->SetTitleOffset(2.5);
hh->Draw("surf");
c->cd(3);
gPad->SetLeftMargin(0.15);
frame3->GetYaxis()->SetTitleOffset(1.4);
frame3->Draw();
c->cd(4);
gPad->SetLeftMargin(0.15);
frame2->GetYaxis()->SetTitleOffset(1.4);
frame2->Draw();
return;
}
#define c(i)
Definition RSha256.hxx:101
@ kRed
Definition Rtypes.h:67
@ kBlue
Definition Rtypes.h:67
ROOT::Detail::TRangeCast< T, true > TRangeDynCast
TRangeDynCast is an adapter class that allows the typed iteration through a TCollection.
Option_t Option_t TPoint TPoint const char GetTextMagnitude GetFillStyle GetLineColor GetLineWidth GetMarkerStyle GetTextAlign GetTextColor GetTextSize void data
#define gPad
RooArgSet is a container object that can hold multiple RooAbsArg objects.
Definition RooArgSet.h:24
Plain Gaussian p.d.f.
Definition RooGaussian.h:24
Class RooIntegralMorph is an implementation of the histogram interpolation technique described by Ale...
Plot frame and a container for graphics objects within that frame.
Definition RooPlot.h:43
RooPolynomial implements a polynomial p.d.f of the form.
Variable that can be changed from the outside.
Definition RooRealVar.h:37
The Canvas class.
Definition TCanvas.h:23
TH1 is the base class of all histogram classes in ROOT.
Definition TH1.h:109
RooCmdArg ShiftToZero()
Double_t x[n]
Definition legend1.C:17
double nll(double pdf, double weight, int binnedL, int doBinOffset)
Definition MathFuncs.h:452
The namespace RooFit contains mostly switches that change the behaviour of functions of PDFs (or othe...
Definition CodegenImpl.h:72
Ta Range(0, 0, 1, 1)
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d5bd80 with pdf g1_MORPH_g2_CACHE_Obs[x]_NORM_x for nset (x) with code 0
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d5bd80 with pdf g1_MORPH_g2_CACHE_Obs[x]_NORM_x for nset (x) with code 0
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d5bd80 with pdf g1_MORPH_g2_CACHE_Obs[x]_NORM_x for nset (x) with code 0
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d5bd80 with pdf g1_MORPH_g2_CACHE_Obs[x]_NORM_x for nset (x) with code 0
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d5bd80 with pdf g1_MORPH_g2_CACHE_Obs[x]_NORM_x for nset (x) with code 0
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d5bd80 with pdf g1_MORPH_g2_CACHE_Obs[x]_NORM_x for nset (x) with code 0
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d5bd80 with pdf g1_MORPH_g2_CACHE_Obs[x]_NORM_x for nset (x) with code 0
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d5bd80 with pdf g1_MORPH_g2_CACHE_Obs[x]_NORM_x for nset (x) with code 0
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d299b0 with pdf g1_MORPH_g2_CACHE_Obs[x]_NORM_x_alpha for nset (x,alpha) with code 0
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d5bd80 with pdf g1_MORPH_g2_CACHE_Obs[x]_NORM_x for nset (x) with code 0
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d299b0 with pdf g1_MORPH_g2_CACHE_Obs[x]_NORM_x for nset (x) with code 0
[#0] PROGRESS:Eval -- RooIntegralMorph::fillCacheObject(lmorph) filling multi-dimensional cache..................................................
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d299b0 with pdf g1_MORPH_g2_CACHE_Obs[alpha,x]_NORM_x for nset (x) with code 0
[#1] INFO:Fitting -- RooAbsPdf::fitTo(lmorph_over_lmorph_Int[x]) fixing normalization set for coefficient determination to observables in data
[#1] INFO:Fitting -- using generic CPU library compiled with no vectorizations
[#1] INFO:Fitting -- Creation of NLL object took 254.365 ms
[#1] INFO:Fitting -- RooAddition::defaultErrorLevel(nll_lmorph_over_lmorph_Int[x]_lmorphData) Summation contains a RooNLLVar, using its error level
[#0] WARNING:Minimization -- RooAbsMinimizerFcn::synchronize: WARNING: no initial error estimate available for alpha: using 0.1
[#1] INFO:Minimization -- [fitFCN] No discrete parameters, performing continuous minimization only
prevFCN = 9770.877306 alpha=0.807,
prevFCN = 9770.136802 alpha=0.7929,
prevFCN = 9771.987074 alpha=0.8008,
prevFCN = 9770.763751 alpha=0.7992,
prevFCN = 9770.751345 alpha=0.8001,
prevFCN = 9770.860999 alpha=0.7999,
prevFCN = 9770.646422
prevFCN = 9770.646422 alpha=0.7994,
prevFCN = 9770.713784 alpha=0.7997,
prevFCN = 9770.676938 alpha=0.8004,
prevFCN = 9770.81299 alpha=0.8002,
prevFCN = 9770.852903 alpha=0.8,
prevFCN = 9770.873215 alpha=0.8,
prevFCN = 9770.636117 alpha=0.8,
prevFCN = 9770.874033 alpha=0.8,
prevFCN = 9770.631397 alpha=0.8,
prevFCN = 9770.874851 alpha=0.8,
prevFCN = 9770.876795 alpha=0.8,
prevFCN = 9770.876491 alpha=0.8,
prevFCN = 9770.633649 alpha=0.8,
prevFCN = 9770.631088 alpha=0.8,
prevFCN = 9770.631706 alpha=0.8,
prevFCN = 9770.875654 alpha=0.8,
prevFCN = 9770.634489 alpha=0.8,
prevFCN = 9770.632904 alpha=0.8,
prevFCN = 9770.632131 alpha=0.8,
prevFCN = 9770.631755 alpha=0.8,
prevFCN = 9770.631571 alpha=0.8,
prevFCN = 9770.631482 alpha=0.8,
prevFCN = 9770.631438 alpha=0.8,
prevFCN = 9770.631417 alpha=0.8,
prevFCN = 9770.631407 alpha=0.8,
prevFCN = 9770.631402 alpha=0.8,
prevFCN = 9770.631399 alpha=0.8,
prevFCN = 9770.631397 alpha=0.8,
prevFCN = 9770.875654 alpha=0.8,
prevFCN = 9770.634489 alpha=0.8,
prevFCN = 9770.631097 alpha=0.8,
prevFCN = 9770.631697 alpha=0.8,
prevFCN = 9770.631337 alpha=0.8,
prevFCN = 9770.631457 alpha=0.8,
prevFCN = 9770.631397 alpha=0.8,
prevFCN = 9770.631337 alpha=0.8,
prevFCN = 9770.631457 alpha=0.8,
prevFCN = 9770.630797 alpha=0.8,
prevFCN = 9770.631997 alpha=0.8,
prevFCN = 9770.631277 alpha=0.8,
prevFCN = 9770.631517 alpha=0.8, [#0] PROGRESS:Eval -- RooIntegralMorph::fillCacheObject(lmorph) filling multi-dimensional cache..................................................
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d5bd80 with pdf g1_MORPH_g2_CACHE_Obs[alpha,x]_NORM_x for nset (x) with code 0
[#0] PROGRESS:Eval -- RooIntegralMorph::fillCacheObject(lmorph) filling multi-dimensional cache..................................................
[#1] INFO:Caching -- RooAbsCachedPdf::getCache(lmorph) creating new cache 0x38d5bd80 with pdf g1_MORPH_g2_CACHE_Obs[alpha,x]_NORM_x for nset (x) with code 0
[#1] INFO:Fitting -- RooAbsPdf::fitTo(lmorph_over_lmorph_Int[x]) fixing normalization set for coefficient determination to observables in data
[#1] INFO:Fitting -- Creation of NLL object took 251.849 ms
Date
July 2008
Author
Wouter Verkerke

Definition in file rf705_linearmorph.C.