A RDataSource implementation which takes a collection of RVecs, which are able to adopt data from Numpy arrays.
This component allows to create a data source on a set of columns with data coming from RVecs. The adoption of externally provided data, e.g., via Numpy arrays, with RVecs allows to read arbitrary data from memory. In addition, the data source has to keep a reference on the Python owned data so that the lifetime of the data is tied to the datasource.
Definition at line 53 of file RVecDS.hxx.
Public Member Functions | |
| RVecDS (const RVecDS &)=delete | |
| RVecDS (RVecDS &&)=delete | |
| RVecDS (std::function< void()> deleteRVecs, std::pair< std::string, ROOT::RVec< ColumnTypes > > const &...colsNameVals) | |
| ~RVecDS () final | |
| const std::vector< std::string > & | GetColumnNames () const |
| Returns a reference to the collection of the dataset's column names. | |
| std::unique_ptr< ROOT::Detail::RDF::RColumnReaderBase > | GetColumnReaders (unsigned int slot, std::string_view colName, const std::type_info &id) final |
| If the other GetColumnReaders overload returns an empty vector, this overload will be called instead. | |
| std::vector< std::pair< ULong64_t, ULong64_t > > | GetEntryRanges () |
| Return ranges of entries to distribute to tasks. | |
| std::string | GetLabel () |
| Return a string representation of the datasource type. | |
| std::string | GetTypeName (std::string_view colName) const |
| Type of a column as a string, e.g. | |
| bool | HasColumn (std::string_view colName) const |
| Checks if the dataset has a certain column. | |
| void | Initialize () |
| Convenience method called before starting an event-loop. | |
| RVecDS & | operator= (const RVecDS &)=delete |
| RVecDS & | operator= (RVecDS &&)=delete |
| bool | SetEntry (unsigned int slot, ULong64_t entry) |
| Advance the "cursors" returned by GetColumnReaders to the selected entry for a particular slot. | |
| void | SetNSlots (unsigned int nSlots) final |
| Inform RDataSource of the number of processing slots (i.e. | |
Public Member Functions inherited from ROOT::RDF::RDataSource | |
| RDataSource ()=default | |
| RDataSource (const RDataSource &)=delete | |
| RDataSource (RDataSource &&)=delete | |
| virtual | ~RDataSource ()=default |
| virtual void | Finalize () |
| Convenience method called after concluding an event-loop. | |
| virtual void | FinalizeSlot (unsigned int) |
| Convenience method called at the end of the data processing associated to a slot. | |
| template<typename T > | |
| std::vector< T ** > | GetColumnReaders (std::string_view columnName) |
| Called at most once per column by RDF. | |
| virtual std::size_t | GetNFiles () const |
| Returns the number of files from which the dataset is constructed. | |
| virtual void | InitSlot (unsigned int, ULong64_t) |
| Convenience method called at the start of the data processing associated to a slot. | |
| RDataSource & | operator= (const RDataSource &)=delete |
| RDataSource & | operator= (RDataSource &&)=delete |
| virtual void | SetGlobalEntryRange (std::pair< ULong64_t, ULong64_t > entryRange) |
| Restrict processing to a [begin, end) range of entries. | |
Protected Member Functions | |
| std::string | AsString () |
Protected Member Functions inherited from ROOT::RDF::RDataSource | |
| virtual std::unique_ptr< ROOT::Detail::RDF::RColumnReaderBase > | CreateColumnReader (unsigned int slot, std::string_view col, const std::type_info &tid, TTreeReader *) |
| Creates a column reader for the requested column. | |
| virtual ROOT::RDF::RSampleInfo | CreateSampleInfo (unsigned int, const std::unordered_map< std::string, ROOT::RDF::Experimental::RSample * > &) const |
| virtual std::string | DescribeDataset () |
| virtual const std::vector< std::string > & | GetColumnNamesNoDuplicates () const |
| virtual const std::vector< std::string > & | GetTopLevelFieldNames () const |
| virtual std::string | GetTypeNameWithOpts (std::string_view colName, bool) const |
| virtual void | InitializeWithOpts (const std::set< std::string > &) |
| virtual void | ProcessMT (ROOT::Detail::RDF::RLoopManager &) |
| virtual void | RunFinalChecks (bool) const |
Private Types | |
| using | PointerHolderPtrs_t = std::vector<ROOT::Internal::RDF::TPointerHolder *> |
Private Member Functions | |
| template<std::size_t... S> | |
| void | ColLengthChecker (std::index_sequence< S... >) |
| Record_t | GetColumnReadersImpl (std::string_view, const std::type_info &) |
| type-erased vector of pointers to pointers to column values - one per slot | |
| size_t | GetEntriesNumber () |
| template<std::size_t... S> | |
| void | SetEntryHelper (unsigned int slot, ULong64_t entry, std::index_sequence< S... >) |
Private Attributes | |
| std::vector< std::string > | fColNames |
| std::unordered_map< std::string, std::string > | fColTypesMap |
| std::tuple< ROOT::RVec< ColumnTypes >... > | fColumns |
| std::function< void()> | fDeleteRVecs |
| std::vector< std::pair< ULong64_t, ULong64_t > > | fEntryRanges {} |
| std::vector< PointerHolderPtrs_t > | fPointerHolders |
| PointerHolderPtrs_t | fPointerHoldersModels |
Additional Inherited Members | |
Protected Types inherited from ROOT::RDF::RDataSource | |
| using | Record_t = std::vector<void *> |
Protected Attributes inherited from ROOT::RDF::RDataSource | |
| std::optional< std::pair< ULong64_t, ULong64_t > > | fGlobalEntryRange {} |
| unsigned int | fNSlots {} |
#include <ROOT/RVecDS.hxx>
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Definition at line 54 of file RVecDS.hxx.
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Definition at line 104 of file RVecDS.hxx.
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Definition at line 118 of file RVecDS.hxx.
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Reimplemented from ROOT::RDF::RDataSource.
Definition at line 101 of file RVecDS.hxx.
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Definition at line 80 of file RVecDS.hxx.
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Returns a reference to the collection of the dataset's column names.
Implements ROOT::RDF::RDataSource.
Definition at line 156 of file RVecDS.hxx.
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If the other GetColumnReaders overload returns an empty vector, this overload will be called instead.
| [in] | slot | The data processing slot that needs to be considered |
| [in] | name | The name of the column for which a column reader needs to be returned |
| [in] | tid | A type_info At least one of the two must return a non-empty/non-null value. |
Reimplemented from ROOT::RDF::RDataSource.
Definition at line 130 of file RVecDS.hxx.
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type-erased vector of pointers to pointers to column values - one per slot
Implements ROOT::RDF::RDataSource.
Definition at line 68 of file RVecDS.hxx.
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Definition at line 70 of file RVecDS.hxx.
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Return ranges of entries to distribute to tasks.
They are required to be contiguous intervals with no entries skipped. Supposing a dataset with nEntries, the intervals must start at 0 and end at nEntries, e.g. [0-5],[5-10] for 10 entries. This function will be invoked repeatedly by RDataFrame as it needs additional entries to process. The same entry range should not be returned more than once. Returning an empty collection of ranges signals to RDataFrame that the processing can stop.
Implements ROOT::RDF::RDataSource.
Definition at line 158 of file RVecDS.hxx.
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Return a string representation of the datasource type.
The returned string will be used by ROOT::RDF::SaveGraph() to represent the datasource in the visualization of the computation graph. Concrete datasources can override the default implementation.
Reimplemented from ROOT::RDF::RDataSource.
Definition at line 222 of file RVecDS.hxx.
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Type of a column as a string, e.g.
GetTypeName("x") == "double". Required for jitting e.g. df.Filter("x>0").
| [in] | colName | The name of the column |
Implements ROOT::RDF::RDataSource.
Definition at line 164 of file RVecDS.hxx.
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Checks if the dataset has a certain column.
| [in] | colName | The name of the column |
Implements ROOT::RDF::RDataSource.
Definition at line 170 of file RVecDS.hxx.
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Convenience method called before starting an event-loop.
This method might be called multiple times over the lifetime of a RDataSource, since users can run multiple event-loops with the same RDataFrame. Ideally, Initialize should set the state of the RDataSource so that multiple identical event-loops will produce identical results.
Reimplemented from ROOT::RDF::RDataSource.
Definition at line 201 of file RVecDS.hxx.
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Advance the "cursors" returned by GetColumnReaders to the selected entry for a particular slot.
| [in] | slot | The data processing slot that needs to be considered |
| [in] | entry | The entry which needs to be pointed to by the reader pointers Slots are adopted to accommodate parallel data processing. Different workers will loop over different ranges and will be labelled by different "slot" values. Returns true if the entry has to be processed, false otherwise. |
Implements ROOT::RDF::RDataSource.
Definition at line 177 of file RVecDS.hxx.
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Definition at line 72 of file RVecDS.hxx.
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Inform RDataSource of the number of processing slots (i.e.
worker threads) used by the associated RDataFrame. Slots numbers are used to simplify parallel execution: RDataFrame guarantees that different threads will always pass different slot values when calling methods concurrently.
Reimplemented from ROOT::RDF::RDataSource.
Definition at line 183 of file RVecDS.hxx.
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Definition at line 57 of file RVecDS.hxx.
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Definition at line 58 of file RVecDS.hxx.
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Definition at line 56 of file RVecDS.hxx.
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Definition at line 66 of file RVecDS.hxx.
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Definition at line 65 of file RVecDS.hxx.
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Definition at line 64 of file RVecDS.hxx.
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Definition at line 63 of file RVecDS.hxx.