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THnSparse.h
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1// @(#)root/hist:$Id$
2// Author: Axel Naumann (2007-09-11)
3
4/*************************************************************************
5 * Copyright (C) 1995-2012, Rene Brun and Fons Rademakers. *
6 * All rights reserved. *
7 * *
8 * For the licensing terms see $ROOTSYS/LICENSE. *
9 * For the list of contributors see $ROOTSYS/README/CREDITS. *
10 *************************************************************************/
11
12#ifndef ROOT_THnSparse
13#define ROOT_THnSparse
14
15/*************************************************************************
16
17 THnSparse: histogramming multi-dimensional, sparse distributions in
18 a memory-efficient way.
19
20*************************************************************************/
21
22
23#include "THnBase.h"
24#include "TExMap.h"
25#include "THnSparse_Internal.h"
26
27// needed only for template instantiations of THnSparseT:
28#include "TArrayF.h"
29#include "TArrayL.h"
30#include "TArrayL64.h"
31#include "TArrayI.h"
32#include "TArrayS.h"
33#include "TArrayC.h"
34
36
37class THnSparse: public THnBase {
38 private:
39 Int_t fChunkSize; ///< Number of entries for each chunk
40 Long64_t fFilledBins; ///< Number of filled bins
41 TObjArray fBinContent; ///< Array of THnSparseArrayChunk
42 TExMap fBins; ///<! Filled bins
43 TExMap fBinsContinued; ///<! Filled bins for non-unique hashes, containing pairs of (bin index 0, bin index 1)
44 THnSparseCompactBinCoord *fCompactCoord; ///<! Compact coordinate
45
46 THnSparse(const THnSparse&) = delete;
47 THnSparse& operator=(const THnSparse&) = delete;
48
49 protected:
50
53 return (THnSparseArrayChunk*) fBinContent[idx]; }
54
56 void Reserve(Long64_t nbins) override;
57 void FillExMap();
58 virtual TArray* GenerateArray() const = 0;
60
61 /// Increment the bin content of "bin" by "w",
62 /// return the bin index.
63 void FillBin(Long64_t bin, Double_t w) override {
65 chunk->AddBinContent(bin % fChunkSize, w);
67 }
68 void InitStorage(Int_t* nbins, Int_t chunkSize) override;
69
70 public:
71
72 THnSparse();
73 THnSparse(const char* name, const char* title, Int_t dim,
74 const Int_t* nbins, const Double_t* xmin = nullptr, const Double_t* xmax = nullptr,
75 Int_t chunksize = 1024 * 16);
76 THnSparse(const char* name, const char* title,
77 const std::vector<TAxis>& axes,
78 Int_t chunksize = 1024 * 16);
79
80 ~THnSparse() override;
81
82 static THnSparse* CreateSparse(const char* name, const char* title,
83 const TH1* h1, Int_t chunkSize = 1024 * 16) {
84 return (THnSparse*) CreateHnAny(name, title, h1, kTRUE /*sparse*/,
85 chunkSize);
86 }
87 static THnSparse* CreateSparse(const char* name, const char* title,
88 const THnBase* hn, Int_t chunkSize = 1024 * 16) {
89 return (THnSparse*) CreateHnAny(name, title, hn, kTRUE /*sparse*/,
90 chunkSize);
91 }
92
93 Int_t GetChunkSize() const { return fChunkSize; }
95
96 ROOT::Internal::THnBaseBinIter* CreateIter(Bool_t respectAxisRange) const override;
97
98 Long64_t GetNbins() const override { return fFilledBins; }
99 void SetFilledBins(Long64_t nbins) override { fFilledBins = nbins; }
100
101 Long64_t GetBin(const Int_t* idx) const override { return const_cast<THnSparse*>(this)->GetBin(idx, kFALSE); }
102 Long64_t GetBin(const Double_t* x) const override { return const_cast<THnSparse*>(this)->GetBin(x, kFALSE); }
103 Long64_t GetBin(const char* name[]) const override { return const_cast<THnSparse*>(this)->GetBin(name, kFALSE); }
104 Long64_t GetBin(const Int_t* idx, Bool_t allocate = kTRUE) override;
105 Long64_t GetBin(const Double_t* x, Bool_t allocate = kTRUE) override;
106 Long64_t GetBin(const char* name[], Bool_t allocate = kTRUE) override;
107
108 /// Forwards to THnBase::SetBinContent().
109 /// Non-virtual, CINT-compatible replacement of a using declaration.
110 void SetBinContent(const Int_t* idx, Double_t v) {
112 }
113 void SetBinContent(Long64_t bin, Double_t v) override;
114 void SetBinError2(Long64_t bin, Double_t e2) override;
115
116 /// Forwards to THnBase::AddBinContent().
117 /// Non-virtual, CINT-compatible replacement of a using declaration.
118 void AddBinContent(const Int_t* idx, Double_t v = 1.) {
120 }
121 void AddBinContent(Long64_t bin, Double_t v = 1.) override;
122 void AddBinError2(Long64_t bin, Double_t e2) override;
123
124 /// Forwards to THnBase::GetBinContent() overload.
125 /// Non-virtual, CINT-compatible replacement of a using declaration.
126 Double_t GetBinContent(const Int_t *idx) const {
127
128 return THnBase::GetBinContent(idx);
129 }
130 Double_t GetBinContent(Long64_t bin, Int_t* idx = nullptr) const override;
131 Double_t GetBinError2(Long64_t linidx) const override;
132
135
136 /// Forwards to THnBase::Projection().
137 /// Non-virtual, as a CINT-compatible replacement of a using
138 /// declaration.
139 TH1D* Projection(Int_t xDim, Option_t* option = "") const{
140 return THnBase::Projection(xDim, option);
141 }
142
143 /// Forwards to THnBase::Projection().
144 /// Non-virtual, as a CINT-compatible replacement of a using
145 /// declaration.
147 Option_t* option = "") const {
148 return THnBase::Projection(yDim, xDim, option);
149 }
150
151 /// Forwards to THnBase::Projection().
152 /// Non-virtual, as a CINT-compatible replacement of a using
153 /// declaration.
154 TH3D* Projection(Int_t xDim, Int_t yDim, Int_t zDim,
155 Option_t* option = "") const {
156 return THnBase::Projection(xDim, yDim, zDim, option);
157 }
158
159 THnSparse* Projection(Int_t ndim, const Int_t* dim,
160 Option_t* option = "") const {
161 return (THnSparse*) ProjectionND(ndim, dim, option);
162 }
163
165 return (THnSparse*) RebinBase(group);
166 }
167 THnSparse* Rebin(const Int_t* group) const {
168 return (THnSparse*) RebinBase(group);
169 }
170
171 void Reset(Option_t* option = "") override;
172 void Sumw2() override;
173
174 ClassDefOverride(THnSparse, 3); // Interfaces of sparse n-dimensional histogram
175};
176
177
178
179//______________________________________________________________________________
180/** \class THnSparseT
181 Templated implementation of the abstract base THnSparse.
182 All functionality and the interfaces to be used are in THnSparse!
183
184 THnSparse does not know how to store any bin content itself. Instead, this
185 is delegated to the derived, templated class: the template parameter decides
186 what the format for the bin content is. In fact it even defines the array
187 itself; possible implementations probably derive from TArray.
188
189 Typedefs exist for template parameters with ROOT's generic types:
190
191 Templated name | Typedef | Bin content type
192 ----------------------|---------------|--------------------
193 THnSparseT<TArrayC> | THnSparseC | Char_t
194 THnSparseT<TArrayS> | THnSparseS | Short_t
195 THnSparseT<TArrayI> | THnSparseI | Int_t
196 THnSparseT<TArrayL64> | THnSparseL | Long64_t
197 THnSparseT<TArrayF> | THnSparseF | Float_t
198 THnSparseT<TArrayD> | THnSparseD | Double_t
199
200 We recommend to use THnSparseC wherever possible, and to map its value space
201 of 256 possible values to e.g. float values outside the class. This saves an
202 enormous amount of memory. Only if more than 256 values need to be
203 distinguished should e.g. THnSparseS or even THnSparseF be chosen.
204
205 Implementation detail: the derived, templated class is kept extremely small
206 on purpose. That way the (templated thus inlined) uses of this class will
207 only create a small amount of machine code, in contrast to e.g. STL.
208*/
209
210
211template <class CONT>
212class THnSparseT: public THnSparse {
213 public:
215
216 TArray* GenerateArray() const override { return new CONT(GetChunkSize()); }
217 private:
218 ClassDefOverride(THnSparseT, 1); // Sparse n-dimensional histogram with templated content
219};
220
227
228
229#endif // ROOT_THnSparse
bool Bool_t
Definition RtypesCore.h:63
int Int_t
Definition RtypesCore.h:45
constexpr Bool_t kFALSE
Definition RtypesCore.h:94
double Double_t
Definition RtypesCore.h:59
long long Long64_t
Definition RtypesCore.h:69
constexpr Bool_t kTRUE
Definition RtypesCore.h:93
const char Option_t
Definition RtypesCore.h:66
#define ClassDefOverride(name, id)
Definition Rtypes.h:346
Option_t Option_t option
char name[80]
Definition TGX11.cxx:110
float xmin
float xmax
THnSparseT< TArrayL64 > THnSparseL
Definition THnSparse.h:223
THnSparseT< TArrayS > THnSparseS
Definition THnSparse.h:225
THnSparseT< TArrayF > THnSparseF
Definition THnSparse.h:222
THnSparseT< TArrayC > THnSparseC
Definition THnSparse.h:226
THnSparseT< TArrayD > THnSparseD
Definition THnSparse.h:221
THnSparseT< TArrayI > THnSparseI
Definition THnSparse.h:224
Iterator over THnBase bins (internal implementation).
Definition THnBase.h:319
Abstract array base class.
Definition TArray.h:31
This class stores a (key,value) pair using an external hash.
Definition TExMap.h:33
1-D histogram with a double per channel (see TH1 documentation)
Definition TH1.h:671
TH1 is the base class of all histogram classes in ROOT.
Definition TH1.h:59
2-D histogram with a double per channel (see TH1 documentation)
Definition TH2.h:358
3-D histogram with a double per channel (see TH1 documentation)
Definition TH3.h:364
Multidimensional histogram base.
Definition THnBase.h:45
void AddBinContent(const Int_t *x, Double_t v=1.)
Definition THnBase.h:195
TH1D * Projection(Int_t xDim, Option_t *option="") const
Project all bins into a 1-dimensional histogram, keeping only axis "xDim".
Definition THnBase.h:230
static THnBase * CreateHnAny(const char *name, const char *title, const TH1 *h1, Bool_t sparse, Int_t chunkSize=1024 *16)
Create a THn / THnSparse object from a histogram deriving from TH1.
Definition THnBase.cxx:336
THnBase * RebinBase(Int_t group) const
Combine the content of "group" neighboring bins into a new bin and return the resulting THnBase.
Definition THnBase.cxx:1245
THnBase * ProjectionND(Int_t ndim, const Int_t *dim, Option_t *option="") const
Definition THnBase.h:261
Double_t GetBinContent(const Int_t *idx) const
Definition THnBase.h:201
void SetBinContent(const Int_t *idx, Double_t v)
Definition THnBase.h:211
void FillBinBase(Double_t w)
Increment the statistics due to filled weight "w",.
Definition THnBase.h:93
THnSparseArrayChunk is used internally by THnSparse.
void AddBinContent(Int_t idx, Double_t v=1.)
THnSparseCompactBinCoord is a class used by THnSparse internally.
Templated implementation of the abstract base THnSparse.
Definition THnSparse.h:212
TArray * GenerateArray() const override
Definition THnSparse.h:216
Efficient multidimensional histogram.
Definition THnSparse.h:37
TH1D * Projection(Int_t xDim, Option_t *option="") const
Forwards to THnBase::Projection().
Definition THnSparse.h:139
Double_t GetSparseFractionBins() const
Return the amount of filled bins over all bins.
Double_t GetSparseFractionMem() const
Return the amount of used memory over memory that would be used by a non-sparse n-dimensional histogr...
THnSparse * Rebin(Int_t group) const
Definition THnSparse.h:164
void Reset(Option_t *option="") override
Clear the histogram.
Int_t GetNChunks() const
Definition THnSparse.h:94
THnSparse & operator=(const THnSparse &)=delete
void AddBinError2(Long64_t bin, Double_t e2) override
Add "e" to error of bin with index "bin", enable errors if needed.
TH3D * Projection(Int_t xDim, Int_t yDim, Int_t zDim, Option_t *option="") const
Forwards to THnBase::Projection().
Definition THnSparse.h:154
void SetBinContent(const Int_t *idx, Double_t v)
Forwards to THnBase::SetBinContent().
Definition THnSparse.h:110
THnSparseArrayChunk * GetChunk(Int_t idx) const
Definition THnSparse.h:52
THnSparseCompactBinCoord * fCompactCoord
! Compact coordinate
Definition THnSparse.h:44
Int_t GetChunkSize() const
Definition THnSparse.h:93
Double_t GetBinContent(const Int_t *idx) const
Forwards to THnBase::GetBinContent() overload.
Definition THnSparse.h:126
Long64_t fFilledBins
Number of filled bins.
Definition THnSparse.h:40
Long64_t GetBin(const Int_t *idx) const override
Definition THnSparse.h:101
TObjArray fBinContent
Array of THnSparseArrayChunk.
Definition THnSparse.h:41
Long64_t GetBin(const char *name[]) const override
Definition THnSparse.h:103
THnSparseCompactBinCoord * GetCompactCoord() const
Return THnSparseCompactBinCoord object.
void InitStorage(Int_t *nbins, Int_t chunkSize) override
Initialize the storage of a histogram created via Init()
static THnSparse * CreateSparse(const char *name, const char *title, const TH1 *h1, Int_t chunkSize=1024 *16)
Definition THnSparse.h:82
Double_t GetBinError2(Long64_t linidx) const override
Get square of the error of bin addressed by linidx as If errors are not enabled (via Sumw2() or Calc...
THnSparse(const THnSparse &)=delete
THnSparse()
Construct an empty THnSparse.
THnSparseArrayChunk * AddChunk()
Create a new chunk of bin content.
virtual TArray * GenerateArray() const =0
void SetBinError2(Long64_t bin, Double_t e2) override
Set error of bin with index "bin" to "e", enable errors if needed.
void FillExMap()
We have been streamed; set up fBins.
THnSparse * Rebin(const Int_t *group) const
Definition THnSparse.h:167
TH2D * Projection(Int_t yDim, Int_t xDim, Option_t *option="") const
Forwards to THnBase::Projection().
Definition THnSparse.h:146
~THnSparse() override
Destruct a THnSparse.
void FillBin(Long64_t bin, Double_t w) override
Increment the bin content of "bin" by "w", return the bin index.
Definition THnSparse.h:63
TExMap fBins
! Filled bins
Definition THnSparse.h:42
Long64_t GetBin(const Double_t *x) const override
Definition THnSparse.h:102
static THnSparse * CreateSparse(const char *name, const char *title, const THnBase *hn, Int_t chunkSize=1024 *16)
Definition THnSparse.h:87
THnSparse * Projection(Int_t ndim, const Int_t *dim, Option_t *option="") const
Definition THnSparse.h:159
TExMap fBinsContinued
! Filled bins for non-unique hashes, containing pairs of (bin index 0, bin index 1)
Definition THnSparse.h:43
void AddBinContent(const Int_t *idx, Double_t v=1.)
Forwards to THnBase::AddBinContent().
Definition THnSparse.h:118
void Reserve(Long64_t nbins) override
Initialize storage for nbins.
Int_t fChunkSize
Number of entries for each chunk.
Definition THnSparse.h:39
void Sumw2() override
Enable calculation of errors.
Long64_t GetNbins() const override
Definition THnSparse.h:98
ROOT::Internal::THnBaseBinIter * CreateIter(Bool_t respectAxisRange) const override
Create an iterator over all filled bins of a THnSparse.
void SetFilledBins(Long64_t nbins) override
Definition THnSparse.h:99
Long64_t GetBinIndexForCurrentBin(Bool_t allocate)
Return the index for fCurrentBinIndex.
An array of TObjects.
Definition TObjArray.h:31
Int_t GetEntriesFast() const
Definition TObjArray.h:58
Double_t x[n]
Definition legend1.C:17
TH1F * h1
Definition legend1.C:5