Re: dlopen error

Hi Philippe,

1. You are right. Its bizarre. I haven't experienced adding "." directory in LD_LIBRARY_PATH before. Why this is so? I am using CERN Lxplus root giving 2 commands

. /afs/cern.ch/sw/lcg/external/gcc/4.3.2/x86_64-slc5/setup.sh

. /afs/cern.ch/sw/lcg/app/releases/ROOT/5.30.01/x86_64-slc5-gcc43-opt/root/bin/thisroot.sh

I thought this is well enough but now one need to take care of LD_LIBRARY_PATH too. It should be automatically in the PATH, No?

Harinder

On Thu, Sep 15, 2011 at 9:36 PM, Philippe Canal <pcanal_at_fnal.gov> wrote:

> > I havent changed single line or word in both, so I dont think there is
> any possibilty of missing "." in file.
>
> I meant that on the machine where you have the dlopen is failing the
> current directory ('.') is not listed
> in the variable LD_LIBRARY_PATH (it is usually added in the user's .cshrc
> or .bashrc). It is usually
> *not* recommended to have '.' listed in the LD_LIBRARY_PATH (for security
> reasons as it provides a
> vector for intrusions). The alternative is to have the directory
> (/tmp/bawa/macros/) listed explicitly
> in the LD_LIBRARY_PATH.
>
>
> > 1. The same package I svn to my fresno t3 and when I compile and run, it
> runs (but crashed with segmentation fault)
>
> As pointed in a different mail, valgrind points out that you code is using
> an histogram pointer after it has been deleted (by closing the file it
> belongs to).
>
> Cheers,
> Philippe.
>
> On 9/15/11 2:25 PM, Harinder Singh Bawa wrote:
>
> Hi Philippe,
>
> But one thing I am not able to understand.
>
> 1. The same package I svn to my fresno t3 and when I compile and run, it
> runs (but crashed with segmentation fault) without giving dlopen error.
>
> 2. To debug, I svn package in lxplus.
>
> The same package if I svn in lxplus , I compile and get dlopen error
>
> dlopen error: JetID_v2.0_cpp.so <http://jetid_v2.0_cpp.so/>: cannot open
> shared object file: No such file or directory
> Load Error: Failed to load Dynamic link library
> /tmp/bawa/macros/./StatisticsAnalysis_C.so
> (int)(-1
>
> I havent changed single line or word in both, so I dont think there is
> any possibilty of missing "." in file.
>
>
>
>
>
>
>
>
>
> On Thu, Sep 15, 2011 at 5:37 PM, Philippe Canal <pcanal_at_fnal.gov> wrote:
>
>> < dlopen error: JetID_v2.0_cpp.so: cannot open shared object file: No
>> such file or directory
>> > Load Error: Failed to load Dynamic link library
>> /tmp/bawa/macros/./StatisticsAnalysis_C.so
>> (int)(-1)
>>
>> The directory in which JetID_v2.0_cpp.so exist is not in the
>> LD_LIBRARY_PATH (in this
>> case it might just '.' that is missing).
>>
>> Cheers,
>> Philippe.
>>
>>
>> On 9/15/11 8:54 AM, Harinder Singh Bawa wrote:
>>
>> Hello,
>>
>> I failed to understand why my code compiles in my tier 3 system when I
>> activate bare ROOT. It crashes while running(But thats seperate issue).
>>
>>
>> But When I use the root coming with Athena in my fresno t3, OR in
>> LXPLUS if I install latest version of root ( Using
>>
>> . /afs/cern.ch/sw/lcg/external/gcc/4.3.2/x86_64-slc5/setup.sh
>>
>> . /afs/cern.ch/sw/lcg/app/releases/ROOT/5.30.01/x86_64-slc5-gcc43-opt/root/bin/thisroot.sh
>>
>> )
>>
>> and runs, it complaints of
>>
>> dlopen error: JetID_v2.0_cpp.so: cannot open shared object file: No such
>> file or directory
>> Load Error: Failed to load Dynamic link library
>> /tmp/bawa/macros/./StatisticsAnalysis_C.so
>> (int)(-1)
>>
>> This JetIDxxx.so , I remade by first removing older JetIDxxx.so and then
>> compiled the code. But it is complaning the same. I removed all *.d and *.so
>> files and re-compiled. But when it runs, it again complains the same. This
>> kid of complaint I am not getting in my fresno t3 system where I activate
>> ROOT only(without athena).
>>
>>
>> Here are the steps I am doing:
>> ==========================
>> [bawa_at_lxplus303 macros]$ ls
>> all.ps JetID_v2.0_cpp.so
>> setLimits.C
>> appendToVector.C log.txt
>> setLimits.h
>> commonFunctions.h makeAngularDistribution.C
>> signal
>> compareSignalTemplates.C makeToyResonance.C
>> singExclusionPlot
>> compile.C masses.txt
>> singRenameBranches
>> cutFlow.C MCDSInfo.h
>> StatisticsAnalysis.C
>> d3pdDijetMassAndChi16.C mergeParallelExpectedLimits.bash
>> StatisticsAnalysis_C.d
>> d3pdDijetMassAndChi16_C.d ntuples
>> StatisticsAnalysis_C.so
>> d3pdDijetMassAndChi16_C.so parallel_expectedLimit.bash
>> StatisticsAnalysis.h
>> d3pdDijetMassAndChi16.h pics
>> studyCorrelations.py
>> d3pdDijetMassAndChi.C PileupReweighting
>> studyWithFrederik.C
>> d3pdDijetMassAndChi.h plotGraphsTogether.C
>> testD3PD.C
>> f_chi_output_J240.root presentDistributionOfLimits.C
>> testMorph.C
>> GRL producePlotsForICHEP.bash
>> tools.h
>> hardCodePlot.C README_instructionsForResonanceSearch.txt
>> ToyGenerator.C
>> inner_CI.root reduceD3PDs.C
>> ToyGenerator.h
>> jesError results_july2011_B_H4
>> TriggerReader
>> JetID rootlogon.C
>> [bawa_at_lxplus303 macros]$ rm *.so
>> [bawa_at_lxplus303 macros]$ rm JetID/
>> JetID_v2.0.cpp JetID_v2.0_cpp.d JetID_v2.0_cpp.so
>> JetID_v2.0.hpp .svn/
>> [bawa_at_lxplus303 macros]$ rm JetID/*.so
>> [bawa_at_lxplus303 macros]$ rm JetID/*.d
>> [bawa_at_lxplus303 macros]$ rm PileupReweighting/
>> ChangeLog python/
>> cmt/ ROOT/
>> ilumicalc_histograms_EF_j180_a4tc_EFFS_178044-183602.root share/
>> ilumicalc_histograms_EF_j180_a4tc_EFFS_178044-184169.root src/
>> mu_mc10a.root StandAlone/
>> mu_mc10b.root .svn/
>> PileupReweighting/
>> [bawa_at_lxplus303 macros]$ rm PileupReweighting/StandAlone/*.so
>> [bawa_at_lxplus303 macros]$ root -b -q compile.C
>> *******************************************
>> * *
>> * W E L C O M E to R O O T *
>> * *
>> * Version 5.30/01 8 August 2011 *
>> * *
>> * You are welcome to visit our Web site *
>> * http://root.cern.ch *
>> * *
>> *******************************************
>>
>> ROOT 5.30/01 (tags/v5-30-01_at_40633, Aug 18 2011, 16:46:17 on
>> linuxx8664gcc)
>>
>> CINT/ROOT C/C++ Interpreter version 5.18.00, July 2, 2010
>> Type ? for help. Commands must be C++ statements.
>> Enclose multiple statements between { }.
>>
>> Welcome to the ATLAS rootlogon.C
>> root [0]
>> Processing compile.C...
>> Using /afs/
>> cern.ch/sw/lcg/app/releases/ROOT/5.30.01/x86_64-slc5-gcc43-opt/root/test/Makefile.arch
>> Linking ../StandAlone/libPileupReweighting.so
>> /tmp/bawa/macros
>> Info in <TUnixSystem::ACLiC>: creating shared library
>> /tmp/bawa/macros/JetID/JetID_v2.0_cpp.so
>> Info in <TUnixSystem::ACLiC>: creating shared library
>> /tmp/bawa/macros/d3pdDijetMassAndChi16_C.so
>> Info in <TUnixSystem::ACLiC>: creating shared library
>> /tmp/bawa/macros/StatisticsAnalysis_C.so
>> [bawa_at_lxplus303 macros]$
>> [bawa_at_lxplus303 macros]$ ./producePlotsForICHEP.bash
>> part 1
>> rm: cannot remove `setLimits_output.root': No such file or directory
>>
>> Welcome to the ATLAS rootlogon.C
>>
>> Processing setLimits.C...
>> dlopen error: JetID_v2.0_cpp.so: cannot open shared object file: No such
>> file or directory
>> Load Error: Failed to load Dynamic link library
>> /tmp/bawa/macros/./StatisticsAnalysis_C.so
>> (int)(-1)
>> cp: cannot stat `setLimits_output.root': No such file or directory
>> cp: cannot stat `pics/fitPythia*': No such file or directory
>> cp: cannot stat `pics/significancePythiaMinusFit*': No such file or
>> directory
>> rm: cannot remove `setLimits_output.root': No such file or directory
>> rm: cannot remove `pics/power.*': No such file or directory
>>
>>
>>
>>
>> Harinder
>>
>>
>
Received on Fri Sep 16 2011 - 10:35:34 CEST