// @(#)root/roostats:$Id$
// Author: Kyle Cranmer, Lorenzo Moneta, Gregory Schott, Wouter Verkerke
/*************************************************************************
 * Copyright (C) 1995-2008, Rene Brun and Fons Rademakers.               *
 * All rights reserved.                                                  *
 *                                                                       *
 * For the licensing terms see $ROOTSYS/LICENSE.                         *
 * For the list of contributors see $ROOTSYS/README/CREDITS.             *
 *************************************************************************/

#ifndef ROOSTATS_ProfileLikelihoodCalculator
#define ROOSTATS_ProfileLikelihoodCalculator

#ifndef ROOSTATS_CombinedCalculator
#include "RooStats/CombinedCalculator.h"
#endif

#include "RooStats/LikelihoodInterval.h"

namespace RooStats {
   
   class LikelihoodInterval; 

 class ProfileLikelihoodCalculator : public CombinedCalculator {

   public:

      // default constructor (needed for I/O)
      ProfileLikelihoodCalculator();

      /// constructor from data, from a full model pdf describing both parameter of interest and nuisance parameters 
      /// and from the set specifying the parameter of interest (POI).
      /// There is no need to specify the nuisance parameters since they are all other parameters of the model. 
      /// When using the calculator for performing an hypothesis test one needs to provide also a snapshot (a copy) 
      /// defining the null parameters and their value. There is no need to pass the alternate parameters. These  
      /// will be obtained by the value maximazing the likelihood function
      ProfileLikelihoodCalculator(RooAbsData& data, RooAbsPdf& pdf, const RooArgSet& paramsOfInterest, 
                                  Double_t size = 0.05, const RooArgSet* nullParams = 0 );


      /// constructor from data and a model configuration
      /// If the ModelConfig defines a prior pdf for any of the parameters those will be included as constrained terms in the 
      /// likelihood function 
      ProfileLikelihoodCalculator(RooAbsData& data, ModelConfig & model, Double_t size = 0.05);


      virtual ~ProfileLikelihoodCalculator();
    
      /// Return a likelihood interval. A global fit to the likelihood is performed and 
      /// the interval is constructed using the the profile likelihood ratio function of the POI
      virtual LikelihoodInterval* GetInterval() const ; 

      /// Return the hypothesis test result obtained from the likelihood ratio of the 
      /// maximum likelihood value with the null parameters fixed to their values, with respect keeping all parameters 
      /// floating (global maximum likelihood value). 
      virtual HypoTestResult* GetHypoTest() const;   
    
      

   protected:

    // clear internal fit result
    void DoReset() const; 
    
    // perform a global fit 
    RooAbsReal * DoGlobalFit() const;
    
    // minimize likelihood
    static RooFitResult * DoMinimizeNLL(RooAbsReal * nll); 

    
    mutable RooFitResult * fFitResult;  // internal  result of gloabl fit
    mutable bool fGlobalFitDone;          // flag to control if a global fit has been done
    

    ClassDef(ProfileLikelihoodCalculator,2) // A concrete implementation of CombinedCalculator that uses the ProfileLikelihood ratio.

   };
}
#endif
 ProfileLikelihoodCalculator.h:1
 ProfileLikelihoodCalculator.h:2
 ProfileLikelihoodCalculator.h:3
 ProfileLikelihoodCalculator.h:4
 ProfileLikelihoodCalculator.h:5
 ProfileLikelihoodCalculator.h:6
 ProfileLikelihoodCalculator.h:7
 ProfileLikelihoodCalculator.h:8
 ProfileLikelihoodCalculator.h:9
 ProfileLikelihoodCalculator.h:10
 ProfileLikelihoodCalculator.h:11
 ProfileLikelihoodCalculator.h:12
 ProfileLikelihoodCalculator.h:13
 ProfileLikelihoodCalculator.h:14
 ProfileLikelihoodCalculator.h:15
 ProfileLikelihoodCalculator.h:16
 ProfileLikelihoodCalculator.h:17
 ProfileLikelihoodCalculator.h:18
 ProfileLikelihoodCalculator.h:19
 ProfileLikelihoodCalculator.h:20
 ProfileLikelihoodCalculator.h:21
 ProfileLikelihoodCalculator.h:22
 ProfileLikelihoodCalculator.h:23
 ProfileLikelihoodCalculator.h:24
 ProfileLikelihoodCalculator.h:25
 ProfileLikelihoodCalculator.h:26
 ProfileLikelihoodCalculator.h:27
 ProfileLikelihoodCalculator.h:28
 ProfileLikelihoodCalculator.h:29
 ProfileLikelihoodCalculator.h:30
 ProfileLikelihoodCalculator.h:31
 ProfileLikelihoodCalculator.h:32
 ProfileLikelihoodCalculator.h:33
 ProfileLikelihoodCalculator.h:34
 ProfileLikelihoodCalculator.h:35
 ProfileLikelihoodCalculator.h:36
 ProfileLikelihoodCalculator.h:37
 ProfileLikelihoodCalculator.h:38
 ProfileLikelihoodCalculator.h:39
 ProfileLikelihoodCalculator.h:40
 ProfileLikelihoodCalculator.h:41
 ProfileLikelihoodCalculator.h:42
 ProfileLikelihoodCalculator.h:43
 ProfileLikelihoodCalculator.h:44
 ProfileLikelihoodCalculator.h:45
 ProfileLikelihoodCalculator.h:46
 ProfileLikelihoodCalculator.h:47
 ProfileLikelihoodCalculator.h:48
 ProfileLikelihoodCalculator.h:49
 ProfileLikelihoodCalculator.h:50
 ProfileLikelihoodCalculator.h:51
 ProfileLikelihoodCalculator.h:52
 ProfileLikelihoodCalculator.h:53
 ProfileLikelihoodCalculator.h:54
 ProfileLikelihoodCalculator.h:55
 ProfileLikelihoodCalculator.h:56
 ProfileLikelihoodCalculator.h:57
 ProfileLikelihoodCalculator.h:58
 ProfileLikelihoodCalculator.h:59
 ProfileLikelihoodCalculator.h:60
 ProfileLikelihoodCalculator.h:61
 ProfileLikelihoodCalculator.h:62
 ProfileLikelihoodCalculator.h:63
 ProfileLikelihoodCalculator.h:64
 ProfileLikelihoodCalculator.h:65
 ProfileLikelihoodCalculator.h:66
 ProfileLikelihoodCalculator.h:67
 ProfileLikelihoodCalculator.h:68
 ProfileLikelihoodCalculator.h:69
 ProfileLikelihoodCalculator.h:70
 ProfileLikelihoodCalculator.h:71
 ProfileLikelihoodCalculator.h:72
 ProfileLikelihoodCalculator.h:73
 ProfileLikelihoodCalculator.h:74
 ProfileLikelihoodCalculator.h:75
 ProfileLikelihoodCalculator.h:76
 ProfileLikelihoodCalculator.h:77
 ProfileLikelihoodCalculator.h:78
 ProfileLikelihoodCalculator.h:79
 ProfileLikelihoodCalculator.h:80