// @(#)root/tmva $Id: GeneticBase.h,v 1.3 2006/05/31 14:01:33 rdm Exp $ // Author: Peter Speckmayer /********************************************************************************** * Project: TMVA - a Root-integrated toolkit for multivariate data analysis * * Package: TMVA * * Class : GeneticBase * * * * Description: * * Base definition for genetic algorithm * * * * Authors (alphabetical): * * Peter Speckmayer - CERN, Switzerland * * * * Copyright (c) 2005: * * CERN, Switzerland, * * U. of Victoria, Canada, * * MPI-KP Heidelberg, Germany * * LAPP, Annecy, France * * * * Redistribution and use in source and binary forms, with or without * * modification, are permitted according to the terms listed in LICENSE * * (http://mva.sourceforge.net/license.txt) * * * **********************************************************************************/ #ifndef ROOT_TMVA_GeneticBase #define ROOT_TMVA_GeneticBase ////////////////////////////////////////////////////////////////////////// // // // GeneticBase // // // // Base definition for genetic algorithm // // // ////////////////////////////////////////////////////////////////////////// #include #include #include #include #include #include "Riostream.h" #ifndef ROOT_TMVA_GeneticPopulation #include "TMVA/GeneticPopulation.h" #endif namespace TMVA { typedef std::pair LowHigh_t; class GeneticBase { public: GeneticBase() {} GeneticBase(Int_t populationSize, std::vector < TMVA::LowHigh_t * > ranges); virtual ~GeneticBase() {} void Init(); virtual Bool_t HasConverged(Int_t steps = 10, Double_t ratio = 0.1); virtual Double_t SpreadControl(Int_t steps, Int_t ofSteps, Double_t factor); Double_t Calc(); virtual Double_t FitnessFunction(const std::vector < Double_t > & factors); virtual Double_t NewFitness(Double_t oldValue, Double_t newValue); virtual Double_t CalculateFitness(); Double_t DoRenewFitness(); virtual Double_t RenewFitness(std::vector < Double_t > factors, std::vector < Double_t > results); virtual void Evolution(); void Finalize(); GeneticPopulation& GetGeneticPopulation() { return fPopulation; } Double_t GetSpread() const { return fSpread; } void SetSpread(Double_t s) { fSpread = s; } protected: // contains and controls the "individual" GeneticPopulation fPopulation; // converging? ... keeps track of the number of improvements Int_t fConvCounter; // keeps track of the quantity of improvement Double_t fConvValue; // spread-control (stepsize) // successList keeps track of the improvements to be able // to adjust the stepSize std::deque < Int_t > fSuccessList; // remembers the last obtained result (for internal use) Double_t fLastResult; Double_t fSpread; // regulates the spread of the value change at mutation (sigma) Bool_t fMirror; // new values for mutation are mirror-mapped if outside of constraints Bool_t fSexual; // allow sexual recombination of individual Bool_t fFirstTime; // if true its the first time, so no evolution yet ClassDef(GeneticBase, 0) // Base definition for genetic algorithm }; } // namespace TMVA #endif