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rs401c_FeldmanCousins.C
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1/// \file
2/// \ingroup tutorial_roostats
3/// \notebook
4/// Produces an interval on the mean signal in a number counting experiment with known background using the
5/// Feldman-Cousins technique.
6///
7/// Using the RooStats FeldmanCousins tool with 200 bins
8/// it takes 1 min and the interval is [0.2625, 10.6125]
9/// with a step size of 0.075.
10/// The interval in Feldman & Cousins's original paper is [.29, 10.81] Phys.Rev.D57:3873-3889,1998.
11///
12/// \macro_image
13/// \macro_output
14/// \macro_code
15///
16/// \author Kyle Cranmer
17
18#include "RooGlobalFunc.h"
24
25#include "RooWorkspace.h"
26#include "RooDataSet.h"
27#include "RooRealVar.h"
28#include "RooConstVar.h"
29#include "RooAddition.h"
30
31#include "RooDataHist.h"
32
33#include "RooPoisson.h"
34#include "RooPlot.h"
35
36#include "TCanvas.h"
37#include "TTree.h"
38#include "TH1F.h"
39#include "TMarker.h"
40#include "TStopwatch.h"
41
42#include <iostream>
43
44// use this order for safety on library loading
45using namespace RooFit;
46using namespace RooStats;
47
49{
50 // to time the macro... about 30 s
51 TStopwatch t;
52 t.Start();
53
54 // make a simple model
55 RooRealVar x("x", "", 1, 0, 50);
56 RooRealVar mu("mu", "", 2.5, 0, 15); // with a limit on mu>=0
57 RooConstVar b("b", "", 3.);
58 RooAddition mean("mean", "", RooArgList(mu, b));
59 RooPoisson pois("pois", "", x, mean);
60 RooArgSet parameters(mu);
61
62 // create a toy dataset
63 std::unique_ptr<RooDataSet> data{pois.generate({x}, 1)};
64 data->Print("v");
65
66 TCanvas *dataCanvas = new TCanvas("dataCanvas");
67 RooPlot *frame = x.frame();
68 data->plotOn(frame);
69 frame->Draw();
70 dataCanvas->Update();
71
73 ModelConfig modelConfig("poissonProblem", w);
74 modelConfig.SetPdf(pois);
75 modelConfig.SetParametersOfInterest(parameters);
76 modelConfig.SetObservables(RooArgSet(x));
77 w->Print();
78
79 //////// show use of Feldman-Cousins
80 RooStats::FeldmanCousins fc(*data, modelConfig);
81 fc.SetTestSize(.05); // set size of test
82 fc.UseAdaptiveSampling(true);
83 fc.FluctuateNumDataEntries(false); // number counting analysis: dataset always has 1 entry with N events observed
84 fc.SetNBins(100); // number of points to test per parameter
85
86 // use the Feldman-Cousins tool
87 PointSetInterval *interval = (PointSetInterval *)fc.GetInterval();
88
89 // make a canvas for plots
90 TCanvas *intervalCanvas = new TCanvas("intervalCanvas");
91
92 std::cout << "is this point in the interval? " << interval->IsInInterval(parameters) << std::endl;
93
94 std::cout << "interval is [" << interval->LowerLimit(mu) << ", " << interval->UpperLimit(mu) << "]" << endl;
95
96 // using 200 bins it takes 1 min and the answer is
97 // interval is [0.2625, 10.6125] with a step size of .075
98 // The interval in Feldman & Cousins's original paper is [.29, 10.81]
99 // Phys.Rev.D57:3873-3889,1998.
100
101 // No dedicated plotting class yet, so do it by hand:
102
103 RooDataHist *parameterScan = (RooDataHist *)fc.GetPointsToScan();
104 TH1F *hist = (TH1F *)parameterScan->createHistogram("mu", Binning(30));
105 hist->Draw();
106
107 RooArgSet *tmpPoint;
108 // loop over points to test
109 for (Int_t i = 0; i < parameterScan->numEntries(); ++i) {
110 // cout << "on parameter point " << i << " out of " << parameterScan->numEntries() << endl;
111 // get a parameter point from the list of points to test.
112 tmpPoint = (RooArgSet *)parameterScan->get(i)->clone("temp");
113
114 TMarker *mark = new TMarker(tmpPoint->getRealValue("mu"), 1, 25);
115 if (interval->IsInInterval(*tmpPoint))
116 mark->SetMarkerColor(kBlue);
117 else
118 mark->SetMarkerColor(kRed);
119
120 mark->Draw("s");
121 // delete tmpPoint;
122 // delete mark;
123 }
124 t.Stop();
125 t.Print();
126}
#define b(i)
Definition RSha256.hxx:100
int Int_t
Definition RtypesCore.h:45
@ kRed
Definition Rtypes.h:66
@ kBlue
Definition Rtypes.h:66
Option_t Option_t TPoint TPoint const char GetTextMagnitude GetFillStyle GetLineColor GetLineWidth GetMarkerStyle GetTextAlign GetTextColor GetTextSize void data
double getRealValue(const char *name, double defVal=0.0, bool verbose=false) const
Get value of a RooAbsReal stored in set with given name.
virtual Int_t numEntries() const
Return number of entries in dataset, i.e., count unweighted entries.
TH1 * createHistogram(const char *name, const RooAbsRealLValue &xvar, const RooCmdArg &arg1={}, const RooCmdArg &arg2={}, const RooCmdArg &arg3={}, const RooCmdArg &arg4={}, const RooCmdArg &arg5={}, const RooCmdArg &arg6={}, const RooCmdArg &arg7={}, const RooCmdArg &arg8={}) const
Calls createHistogram(const char *name, const RooAbsRealLValue& xvar, const RooLinkedList& argList) c...
Calculates the sum of a set of RooAbsReal terms, or when constructed with two sets,...
Definition RooAddition.h:27
RooArgList is a container object that can hold multiple RooAbsArg objects.
Definition RooArgList.h:22
RooArgSet is a container object that can hold multiple RooAbsArg objects.
Definition RooArgSet.h:55
TObject * clone(const char *newname) const override
Definition RooArgSet.h:148
Represents a constant real-valued object.
Definition RooConstVar.h:23
Container class to hold N-dimensional binned data.
Definition RooDataHist.h:40
const RooArgSet * get() const override
Get bin centre of current bin.
Definition RooDataHist.h:82
Plot frame and a container for graphics objects within that frame.
Definition RooPlot.h:45
static RooPlot * frame(const RooAbsRealLValue &var, double xmin, double xmax, Int_t nBins)
Create a new frame for a given variable in x.
Definition RooPlot.cxx:225
void Draw(Option_t *options=nullptr) override
Draw this plot and all of the elements it contains.
Definition RooPlot.cxx:637
Poisson pdf.
Definition RooPoisson.h:19
Variable that can be changed from the outside.
Definition RooRealVar.h:37
The FeldmanCousins class (like the Feldman-Cousins technique) is essentially a specific configuration...
ModelConfig is a simple class that holds configuration information specifying how a model should be u...
Definition ModelConfig.h:35
PointSetInterval is a concrete implementation of the ConfInterval interface.
double UpperLimit(RooRealVar &param)
return upper limit on a given parameter
bool IsInInterval(const RooArgSet &) const override
check if parameter is in the interval
double LowerLimit(RooRealVar &param)
return lower limit on a given parameter
Persistable container for RooFit projects.
virtual void SetMarkerColor(Color_t mcolor=1)
Set the marker color.
Definition TAttMarker.h:38
The Canvas class.
Definition TCanvas.h:23
void Update() override
Update canvas pad buffers.
Definition TCanvas.cxx:2476
1-D histogram with a float per channel (see TH1 documentation)
Definition TH1.h:621
void Draw(Option_t *option="") override
Draw this histogram with options.
Definition TH1.cxx:3066
Manages Markers.
Definition TMarker.h:22
void Draw(Option_t *option="") override
Draw this marker with its current attributes.
Definition TMarker.cxx:199
Stopwatch class.
Definition TStopwatch.h:28
void Start(Bool_t reset=kTRUE)
Start the stopwatch.
void Stop()
Stop the stopwatch.
void Print(Option_t *option="") const override
Print the real and cpu time passed between the start and stop events.
RooCmdArg Binning(const RooAbsBinning &binning)
Double_t x[n]
Definition legend1.C:17
The namespace RooFit contains mostly switches that change the behaviour of functions of PDFs (or othe...
Definition JSONIO.h:26
Namespace for the RooStats classes.
Definition Asimov.h:19