TMVACrossValidation_Fisher.class.C

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// Class: ReadFisher
// Automatically generated by MethodBase::MakeClass
//

/* configuration options =====================================================

#GEN -*-*-*-*-*-*-*-*-*-*-*- general info -*-*-*-*-*-*-*-*-*-*-*-

Method         : CrossValidation::Fisher
TMVA Release   : 4.2.1         [262657]
ROOT Release   : 6.14/05       [396805]
Creator        : sftnight
Date           : Fri Nov  2 10:41:50 2018
Host           : Linux ec-ubuntu-14-04-x86-64-2 3.13.0-157-generic #207-Ubuntu SMP Mon Aug 20 16:44:59 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux
Dir            : /mnt/build/workspace/root-makedoc-v614/rootspi/rdoc/src/v6-14-00-patches/documentation/doxygen
Training events: 1998
Analysis type  : [Classification]


#OPT -*-*-*-*-*-*-*-*-*-*-*-*- options -*-*-*-*-*-*-*-*-*-*-*-*-

# Set by User:
EncapsulatedMethodName: "Fisher" []
EncapsulatedMethodTypeName: "Fisher" []
NumFolds: "2" [Number of folds to generate]
OutputEnsembling: "None" [Combines output from contained methods. If None, no combination is performed. (default None)]
SplitExpr: "" [The expression used to assign events to folds]
# Default:
V: "False" [Verbose output (short form of "VerbosityLevel" below - overrides the latter one)]
VerbosityLevel: "Default" [Verbosity level]
VarTransform: "None" [List of variable transformations performed before training, e.g., "D_Background,P_Signal,G,N_AllClasses" for: "Decorrelation, PCA-transformation, Gaussianisation, Normalisation, each for the given class of events ('AllClasses' denotes all events of all classes, if no class indication is given, 'All' is assumed)"]
H: "False" [Print method-specific help message]
CreateMVAPdfs: "False" [Create PDFs for classifier outputs (signal and background)]
IgnoreNegWeightsInTraining: "False" [Events with negative weights are ignored in the training (but are included for testing and performance evaluation)]
##


#VAR -*-*-*-*-*-*-*-*-*-*-*-* variables *-*-*-*-*-*-*-*-*-*-*-*-

NVar 2
x                             x                             x                             x                                                               'F'    [-4.10750675201,4.09692668915]
y                             y                             y                             y                                                               'F'    [-4.85200452805,4.07606744766]
NSpec 1
eventID                       eventID                       eventID                       I                                                               'F'    [1,1000]


============================================================================ */

#include <array>
#include <vector>
#include <cmath>
#include <string>
#include <iostream>

#ifndef IClassifierReader__def
#define IClassifierReader__def

class IClassifierReader {

 public:

   // constructor
   IClassifierReader() : fStatusIsClean( true ) {}
   virtual ~IClassifierReader() {}

   // return classifier response
   virtual double GetMvaValue( const std::vector<double>& inputValues ) const = 0;

   // returns classifier status
   bool IsStatusClean() const { return fStatusIsClean; }

 protected:

   bool fStatusIsClean;
};

#endif

class ReadFisher : public IClassifierReader {

 public:

   // constructor
   ReadFisher( std::vector<std::string>& theInputVars )
      : IClassifierReader(),
        fClassName( "ReadFisher" ),
        fNvars( 2 ),
        fIsNormalised( false )
   {
      // the training input variables
      const char* inputVars[] = { "x", "y" };

      // sanity checks
      if (theInputVars.size() <= 0) {
         std::cout << "Problem in class \"" << fClassName << "\": empty input vector" << std::endl;
         fStatusIsClean = false;
      }

      if (theInputVars.size() != fNvars) {
         std::cout << "Problem in class \"" << fClassName << "\": mismatch in number of input values: "
                   << theInputVars.size() << " != " << fNvars << std::endl;
         fStatusIsClean = false;
      }

      // validate input variables
      for (size_t ivar = 0; ivar < theInputVars.size(); ivar++) {
         if (theInputVars[ivar] != inputVars[ivar]) {
            std::cout << "Problem in class \"" << fClassName << "\": mismatch in input variable names" << std::endl
                      << " for variable [" << ivar << "]: " << theInputVars[ivar].c_str() << " != " << inputVars[ivar] << std::endl;
            fStatusIsClean = false;
         }
      }

      // initialize min and max vectors (for normalisation)
      fVmin[0] = 0;
      fVmax[0] = 0;
      fVmin[1] = 0;
      fVmax[1] = 0;

      // initialize input variable types
      fType[0] = 'F';
      fType[1] = 'F';

      // initialize constants
      Initialize();

   }

   // destructor
   virtual ~ReadFisher() {
      Clear(); // method-specific
   }

   // the classifier response
   // "inputValues" is a vector of input values in the same order as the
   // variables given to the constructor
   double GetMvaValue( const std::vector<double>& inputValues ) const override;

 private:

   // method-specific destructor
   void Clear();

   // common member variables
   const char* fClassName;

   const size_t fNvars;
   size_t GetNvar()           const { return fNvars; }
   char   GetType( int ivar ) const { return fType[ivar]; }

   // normalisation of input variables
   const bool fIsNormalised;
   bool IsNormalised() const { return fIsNormalised; }
   double fVmin[2];
   double fVmax[2];
   double NormVariable( double x, double xmin, double xmax ) const {
      // normalise to output range: [-1, 1]
      return 2*(x - xmin)/(xmax - xmin) - 1.0;
   }

   // type of input variable: 'F' or 'I'
   char   fType[2];

   // initialize internal variables
   void Initialize();
   double GetMvaValue__( const std::vector<double>& inputValues ) const;

   // private members (method specific)
   inline double ReadFisher::GetMvaValue( const std::vector<double>& inputValues ) const
   {
      // classifier response value
      double retval = 0;

      // classifier response, sanity check first
      if (!IsStatusClean()) {
         std::cout << "Problem in class \"" << fClassName << "\": cannot return classifier response"
                   << " because status is dirty" << std::endl;
         retval = 0;
      }
      else {
         if (IsNormalised()) {
            // normalise variables
            std::vector<double> iV;
            iV.reserve(inputValues.size());
            int ivar = 0;
            for (std::vector<double>::const_iterator varIt = inputValues.begin();
                 varIt != inputValues.end(); varIt++, ivar++) {
               iV.push_back(NormVariable( *varIt, fVmin[ivar], fVmax[ivar] ));
            }
            retval = GetMvaValue__( iV );
         }
         else {
            retval = GetMvaValue__( inputValues );
         }
      }

      return retval;
   }