96 std::vector<Int_t> aUnzipLen = std::vector<Int_t>(newSize, 0);
97 std::unique_ptr<char[]> *aUnzipChunks =
new std::unique_ptr<char[]>[newSize];
98 std::atomic<Byte_t> *aUnzipStatus =
new std::atomic<Byte_t>[newSize];
100 for (
Int_t i = 0; i < newSize; ++i)
101 aUnzipStatus[i].store(0);
103 for (
Int_t i = 0; i < oldSize; i++) {
104 aUnzipLen[i] = fUnzipLen[i];
105 aUnzipChunks[i] = std::move(fUnzipChunks[i]);
106 aUnzipStatus[i].store(fUnzipStatus[i].load());
109 if (fUnzipChunks)
delete [] fUnzipChunks;
110 if (fUnzipStatus)
delete [] fUnzipStatus;
112 fUnzipLen = aUnzipLen;
113 fUnzipChunks = aUnzipChunks;
114 fUnzipStatus = aUnzipStatus;
127 fUnzipLen[
index] = 0;
128 fUnzipChunks[
index].reset();
135 fUnzipChunks[
index].reset();
144 fUnzipChunks[
index].reset(buf);
154 return fUnzipStatus[
index].compare_exchange_weak(oldValue, newValue, std::memory_order_release, std::memory_order_relaxed);
179 fAsyncReading(false),
201 fIOMutex = std::make_unique<TMutex>(
true);
215 Info(
"TTreeCacheUnzip",
"Enabling Parallel Unzipping");
221 Warning(
"TTreeCacheUnzip",
"Parallel Option unknown");
276 Long64_t entry = tree->GetReadEntry();
285 if (entry == -1) entry = 0;
314 if (
b->GetDirectory() ==
nullptr)
continue;
315 if (
b->GetDirectory()->GetFile() !=
fFile)
continue;
316 Int_t nb =
b->GetMaxBaskets();
317 Int_t *lbaskets =
b->GetBasketBytes();
319 if (!lbaskets || !entries)
continue;
322 Int_t blistsize =
b->GetListOfBaskets()->GetSize();
323 for (
Int_t j=0;j<nb;j++) {
325 if (j<blistsize && b->GetListOfBaskets()->UncheckedAt(j))
continue;
329 if (pos <= 0 ||
len <= 0)
continue;
332 if (entries[j] < entry && (j < nb - 1 && entries[j+1] <= entry))
continue;
335 if (j < nb - 1) emax = entries[j+1] - 1;
336 if (!elist->
ContainsRange(entries[j] + chainOffset, emax + chainOffset))
continue;
476 Int_t nread = maxbytes;
479 if (nb < 0)
return nread;
481 const Int_t headerSize = 16;
482 if (nread < headerSize)
return nread;
487 if (!olen) olen = nbytes - klen;
530 const Int_t hlen = 128;
531 Int_t objlen = 0, keylen = 0;
554 char* locbuff =
nullptr;
556 locbuff =
new char[rdlen];
557 }
else if (rdlen * 3 < 16384) {
558 locbuff =
new char[rdlen * 2];
560 locbuff =
new char[16384];
567 if (locbuff)
delete [] locbuff;
573 Int_t len = (objlen > nbytes - keylen) ? keylen + objlen : nbytes;
580 Info(
"UnzipCache",
"Block %d is too big, skipping.",
index);
583 if (locbuff)
delete [] locbuff;
590 if ((loclen > 0) && (loclen == objlen + keylen)) {
593 if (locbuff)
delete [] locbuff;
604 if (locbuff)
delete [] locbuff;
616 auto mapFunction = [&]() {
617 auto unzipFunction = [&](
const std::vector<Int_t> &indices) {
621 for (
auto ii : indices) {
626 Info(
"UnzipCache",
"Unzipping failed or cache is in learning state");
633 std::vector<std::vector<Int_t>> basketIndices;
634 std::vector<Int_t> indices;
639 indices.push_back(i);
644 basketIndices.push_back(indices);
649 pool.
Foreach(unzipFunction, basketIndices);
743 if ( myCycle !=
fCycle ) {
745 Info(
"GetUnzipBuffer",
"Sudden paging Break!!! fNseek: %d, fIsLearning:%d",
860 const Int_t hlen = 128;
861 Int_t nbytes = 0, objlen = 0, keylen = 0;
868 if(objlen > nbytes - keylen &&
R__unzip_header(&nin, bufcur, &nbuf) != 0) {
869 Error(
"UnzipBuffer",
"Inconsistency found in header (nin=%d, nbuf=%d)", nin, nbuf);
873 Int_t l = keylen + objlen;
883 bool oldCase = objlen == nbytes - keylen
887 if (objlen > nbytes-keylen || oldCase) {
893 char *objbuf = *
dest + keylen;
903 Info(
"UnzipBuffer",
" nin:%d, nbuf:%d, bufcur[3] :%d, bufcur[4] :%d, bufcur[5] :%d ",
904 nin, nbuf, bufcur[3], bufcur[4], bufcur[5]);
905 if (oldCase && (nin > objlen || nbuf > objlen)) {
907 Info(
"UnzipBuffer",
"oldcase objlen :%d ", objlen);
910 memcpy(*
dest + keylen,
src + keylen, objlen);
915 R__unzip(&nin, bufcur, &nbuf, objbuf, &nout);
918 Info(
"UnzipBuffer",
"R__unzip nin:%d, bufcur:%p, nbuf:%d, objbuf:%p, nout:%d",
919 nin, bufcur, nbuf, objbuf, nout);
923 if (noutot >= objlen)
break;
928 if (noutot != objlen) {
929 Error(
"UnzipBuffer",
"nbytes = %d, keylen = %d, objlen = %d, noutot = %d, nout=%d, nin=%d, nbuf=%d",
930 nbytes,keylen,objlen, noutot,nout,nin,nbuf);
932 if(alloc)
delete [] *
dest;
940 memcpy(*
dest + keylen,
src + keylen, objlen);
950 printf(
"******TreeCacheUnzip statistics for file: %s ******\n",
fFile->
GetName());
952 printf(
"Number of blocks unzipped by threads: %d\n",
fNUnzip);
953 printf(
"Number of hits: %d\n",
fNFound);
954 printf(
"Number of stalls: %d\n",
fNStalls);
955 printf(
"Number of misses: %d\n",
fNMissed);
void frombuf(char *&buf, Bool_t *x)
size_t size(const MatrixT &matrix)
retrieve the size of a square matrix
Option_t Option_t TPoint TPoint const char GetTextMagnitude GetFillStyle GetLineColor GetLineWidth GetMarkerStyle GetTextAlign GetTextColor GetTextSize void char Point_t Rectangle_t dest
Option_t Option_t TPoint TPoint const char GetTextMagnitude GetFillStyle GetLineColor GetLineWidth GetMarkerStyle GetTextAlign GetTextColor GetTextSize void char Point_t Rectangle_t WindowAttributes_t index
Option_t Option_t TPoint TPoint const char GetTextMagnitude GetFillStyle GetLineColor GetLineWidth GetMarkerStyle GetTextAlign GetTextColor GetTextSize void char Point_t Rectangle_t WindowAttributes_t Float_t Float_t Float_t Int_t Int_t UInt_t UInt_t Rectangle_t Int_t Int_t Window_t TString Int_t GCValues_t GetPrimarySelectionOwner GetDisplay GetScreen GetColormap GetNativeEvent const char const char dpyName wid window const char font_name cursor keysym reg const char only_if_exist regb h Point_t winding char text const char depth char const char Int_t count const char ColorStruct_t color const char Pixmap_t Pixmap_t PictureAttributes_t attr const char char ret_data h unsigned char height h Atom_t Int_t ULong_t ULong_t unsigned char prop_list Atom_t Atom_t Atom_t Time_t UChar_t len
Option_t Option_t TPoint TPoint const char GetTextMagnitude GetFillStyle GetLineColor GetLineWidth GetMarkerStyle GetTextAlign GetTextColor GetTextSize void char Point_t Rectangle_t src
void R__unzip(Int_t *nin, UChar_t *bufin, Int_t *lout, char *bufout, Int_t *nout)
int R__unzip_header(Int_t *nin, UChar_t *bufin, Int_t *lout)
#define R__LOCKGUARD(mutex)
This class provides a simple interface to execute the same task multiple times in parallel threads,...
void Foreach(F func, unsigned nTimes, unsigned nChunks=0)
Execute a function without arguments several times in parallel, dividing the execution in nChunks.
A TTree is a list of TBranches.
A chain is a collection of files containing TTree objects.
Long64_t * GetTreeOffset() const
Int_t GetTreeNumber() const override
virtual Int_t GetValue(const char *name, Int_t dflt) const
Returns the integer value for a resource.
<div class="legacybox"><h2>Legacy Code</h2> TEventList is a legacy interface: there will be no bug fi...
virtual bool ContainsRange(Long64_t entrymin, Long64_t entrymax)
Return TRUE if list contains entries from entrymin to entrymax included.
Int_t * fSeekIndex
[fNseek] sorted index table of fSeek
virtual Int_t ReadBufferExt(char *buf, Long64_t pos, Int_t len, Int_t &loc)
Long64_t * fSeekSort
[fNseek] Position on file of buffers to be prefetched (sorted)
Int_t * fSeekLen
[fNseek] Length of buffers to be prefetched
Int_t fNtot
Total size of prefetched blocks.
virtual void Prefetch(Long64_t pos, Int_t len)
Add block of length len at position pos in the list of blocks to be prefetched.
Long64_t * fSeek
[fNseek] Position on file of buffers to be prefetched
Bool_t fIsTransferred
True when fBuffer contains something valid.
TFile * fFile
Pointer to file.
Int_t fNseek
Number of blocks to be prefetched.
virtual Int_t GetBufferSize() const
virtual void Seek(Long64_t offset, ERelativeTo pos=kBeg)
Seek to a specific position in the file. Pos it either kBeg, kCur or kEnd.
virtual Bool_t ReadBufferAsync(Long64_t offs, Int_t len)
virtual Bool_t ReadBuffer(char *buf, Int_t len)
Read a buffer from the file.
const char * GetName() const override
Returns name of object.
TObject * UncheckedAt(Int_t i) const
virtual void Warning(const char *method, const char *msgfmt,...) const
Issue warning message.
virtual void Error(const char *method, const char *msgfmt,...) const
Issue error message.
virtual void Info(const char *method, const char *msgfmt,...) const
Issue info message.
A TTreeCache which exploits parallelized decompression of its own content.
void Init()
Initialization procedure common to all the constructors.
Int_t UnzipCache(Int_t index)
This inflates a basket in the cache.
Int_t SetBufferSize(Long64_t buffersize) override
Change the underlying buffer size of the cache.
Int_t fNMissed
! number of blocks that were not found in the cache and were unzipped
void UpdateBranches(TTree *tree) override
update pointer to current Tree and recompute pointers to the branches in the cache
Int_t AddBranch(TBranch *b, bool subbranches=false) override
Add a branch to the list of branches to be stored in the cache this function is called by TBranch::Ge...
void ResetCache() override
This will delete the list of buffers that are in the unzipping cache and will reset certain values in...
void SetEntryRange(Long64_t emin, Long64_t emax) override
Set the minimum and maximum entry number to be processed this information helps to optimize the numbe...
static bool IsParallelUnzip()
Static function that tells wether the multithreading unzipping is activated.
Int_t fNseekMax
! fNseek can change so we need to know its max size
Int_t fNStalls
! number of hits which caused a stall
static TTreeCacheUnzip::EParUnzipMode fgParallel
Indicate if we want to activate the parallelism.
std::unique_ptr< ROOT::Experimental::TTaskGroup > fUnzipTaskGroup
static Int_t SetParallelUnzip(TTreeCacheUnzip::EParUnzipMode option=TTreeCacheUnzip::kEnable)
Static function that (de)activates multithreading unzipping.
bool FillBuffer() override
Fill the cache buffer with the branches in the cache.
Int_t ReadBufferExt(char *buf, Long64_t pos, Int_t len, Int_t &loc) override
Int_t UnzipBuffer(char **dest, char *src)
Unzips a ROOT specific buffer... by reading the header at the beginning.
Int_t GetRecordHeader(char *buf, Int_t maxbytes, Int_t &nbytes, Int_t &objlen, Int_t &keylen)
Read the logical record header from the buffer buf.
static void SetUnzipRelBufferSize(Float_t relbufferSize)
static function: Sets the unzip relative buffer size
std::unique_ptr< TMutex > fIOMutex
Int_t fNUnzip
! number of blocks that were unzipped
Int_t CreateTasks()
We create a TTaskGroup and asynchronously maps each group of baskets(> 100 kB in total) to a task.
Int_t GetUnzipBuffer(char **buf, Long64_t pos, Int_t len, bool *free) override
We try to read a buffer that has already been unzipped Returns -1 in case of read failure,...
Long64_t fUnzipBufferSize
! Max Size for the ready unzipped blocks (default is 2*fBufferSize)
void SetUnzipBufferSize(Long64_t bufferSize)
Sets the size for the unzipping cache... by default it should be two times the size of the prefetchin...
Int_t fUnzipGroupSize
! Min accumulated size of a group of baskets ready to be unzipped by a IMT task
void StopLearningPhase() override
It's the same as TTreeCache::StopLearningPhase but we guarantee that we start the unzipping just afte...
void Print(Option_t *option="") const override
Print cache statistics.
bool fParallel
Indicate if we want to activate the parallelism (for this instance)
Int_t fNFound
! number of blocks that were found in the cache
static Double_t fgRelBuffSize
This is the percentage of the TTreeCacheUnzip that will be used.
~TTreeCacheUnzip() override
Destructor. (in general called by the TFile destructor)
static EParUnzipMode GetParallelUnzip()
Static function that returns the parallel option (to indicate an additional thread)
A cache to speed-up the reading of ROOT datasets.
virtual void UpdateBranches(TTree *tree)
Update pointer to current Tree and recompute pointers to the branches in the cache.
Int_t SetBufferSize(Long64_t buffersize) override
Change the underlying buffer size of the cache.
Long64_t fEntryMin
! first entry in the cache
Long64_t fEntryNext
! next entry number where cache must be filled
bool fIsLearning
! true if cache is in learning mode
virtual void SetEntryRange(Long64_t emin, Long64_t emax)
Set the minimum and maximum entry number to be processed this information helps to optimize the numbe...
Long64_t fEntryMax
! last entry in the cache
Long64_t fEntryCurrent
! current lowest entry number in the cache
Int_t fNReadPref
Number of blocks that were prefetched.
TTree * fTree
! pointer to the current Tree
virtual void StopLearningPhase()
This is the counterpart of StartLearningPhase() and can be used to stop the learning phase.
Int_t fNbranches
! Number of branches in the cache
void Print(Option_t *option="") const override
Print cache statistics.
Int_t AddBranch(TBranch *b, bool subgbranches=false) override
Add a branch to the list of branches to be stored in the cache this function is called by the user vi...
TObjArray * fBranches
! List of branches to be stored in the cache
Helper class to iterate over cluster of baskets.
A TTree represents a columnar dataset.
TEventList * GetEventList() const
TClass * IsA() const override
Bool_t IsImplicitMTEnabled()
Returns true if the implicit multi-threading in ROOT is enabled.
Long64_t BinarySearch(Long64_t n, const T *array, T value)
Binary search in an array of n values to locate value.
void Reset(Int_t oldSize, Int_t newSize)
Reset all baskets' state arrays.
void Clear(Int_t size)
Clear all baskets' state arrays.
bool IsUnzipped(Int_t index) const
Check if the basket is unzipped already.
bool IsFinished(Int_t index) const
std::atomic< Byte_t > * fUnzipStatus
! [fNSeek]
void SetUnzipped(Int_t index, char *buf, Int_t len)
std::vector< Int_t > fUnzipLen
! [fNseek] Length of the unzipped buffers
bool TryUnzipping(Int_t index)
Start unzipping the basket if it is untouched yet.
void SetMissed(Int_t index)
bool IsProgress(Int_t index) const
bool IsUntouched(Int_t index) const
void SetFinished(Int_t index)
Set cache as finished.
std::unique_ptr< char[]> * fUnzipChunks
! [fNseek] Individual unzipped chunks. Their summed size is kept under control.